DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and rab-35

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_499454.1 Gene:rab-35 / 176560 WormBaseID:WBGene00004284 Length:209 Species:Caenorhabditis elegans


Alignment Length:200 Identity:86/200 - (43%)
Similarity:125/200 - (62%) Gaps:5/200 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQER 82
            :|.|||:::|||.|.||:.::.||....:.|.:..||||||.::|:.:.|:::||||||||||||
 Worm     7 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQER 71

  Fly    83 FRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFE 147
            |||||.:|||..:||::|||:|...||.|:::|::|:.. ...:|..:||||||:..|:|.|...
 Worm    72 FRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIEN-NCDSVQKVLVGNKCEENERRVVLES 135

  Fly   148 EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITLGQGKPLKSC 212
            :||...|.:....|  ||||||:.|||..|.|:.:.:.....||......:.:.|  .|..||..
 Worm   136 DARNYAQSMNISFF--ETSAKEDKNVEPMFTCITSLVLTAKLANPQSASKDQSRT--GGVSLKDN 196

  Fly   213 SSSCN 217
            |.|.|
 Worm   197 SGSTN 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 77/164 (47%)
rab-35NP_499454.1 Rab35 5..208 CDD:133310 85/199 (43%)

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