DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and IFT27

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001171172.1 Gene:IFT27 / 11020 HGNCID:18626 Length:186 Species:Homo sapiens


Alignment Length:167 Identity:61/167 - (36%)
Similarity:92/167 - (55%) Gaps:9/167 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KIVLIGDCGTGKTCIVDRFKT--GNYIERHGNTIGVDFSMKTIAV--EGKQIKLQIWDTAGQERF 83
            |.:|.||...|||.:...|::  .::.:.:..|.|:|..:||:.|  .|..::|.|:|:||:|.|
Human     7 KCILAGDPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIFDSAGKELF 71

  Fly    84 RTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLI--ILVGNKCDLEEQREVDF 146
            ..:....:.|.|.:.:|||:|...||:|..||:|:.|. .|..:.:  :|||||.||..:|.||.
Human    72 SEMLDKLWESPNVLCLVYDVTNEESFNNCSKWLEKARS-QAPGISLPGVLVGNKTDLAGRRAVDS 135

  Fly   147 EEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANE 183
            .|||...  :.:.|...|||.||..|.|..|.|||.:
Human   136 AEARAWA--LGQGLECFETSVKEMENFEAPFHCLAKQ 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 61/167 (37%)
IFT27NP_001171172.1 RabL4 6..172 CDD:206688 61/167 (37%)

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