DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and rab8b

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001090677.1 Gene:rab8b / 100036650 XenbaseID:XB-GENE-480278 Length:207 Species:Xenopus tropicalis


Alignment Length:198 Identity:86/198 - (43%)
Similarity:131/198 - (66%) Gaps:7/198 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQER 82
            :|:|||::||||.|.||||::.||....:.....:|||:||.::||.::||:|||||||||||||
 Frog     5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69

  Fly    83 FRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFE 147
            |||||.:|||.|.|:::|||||...||.|::.||..:..:.:|:|..:::|||||:.::|:|..|
 Frog    70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSRE 134

  Fly   148 EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITLGQGKPLKSC 212
            :..::.  |...:..:|||||.::|||:||..||.::     ...:......:|:.|.|.|:|..
 Frog   135 KGEKLA--IDYGIKFLETSAKSSINVEEAFFTLARDI-----MTKLNRKMNESISPGGGGPVKIT 192

  Fly   213 SSS 215
            ..|
 Frog   193 EKS 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 80/164 (49%)
rab8bNP_001090677.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 80/172 (47%)

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