DRSC/TRiP Functional Genomics Resources

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Protein Alignment cert and Plekha3

DIOPT Version :9

Sequence 1:NP_001286978.1 Gene:cert / 38928 FlyBaseID:FBgn0027569 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_112546.1 Gene:Plekha3 / 83435 MGIID:1932515 Length:297 Species:Mus musculus


Alignment Length:265 Identity:71/265 - (26%)
Similarity:122/265 - (46%) Gaps:41/265 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LRGYLSKWTNYIYGWQPRYIVLKDGTLSYYKSESESDFGCRGAISLTKATIKAHESDELRFDVVV 106
            :.|.|.|||||:.|||||:.||.:|.||||.|:.:...|.:|:|.:....||.|.:|..|.::::
Mouse     1 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAVCEIKVHPADNTRMELII 65

  Fly   107 NNLNNWCLRAETSEDRMHWVDVLQLYKADSGSTDTTSLRRHGSTMSLQSNTISLTSGGSLKKTQR 171
            ....::.::|..:.:|..|:..|...||  ..|||.:.:..                 .:.:|..
Mouse    66 PGEQHFYMKAVNAAERQRWLVALGSSKA--CLTDTRTAKEK-----------------EISETSE 111

  Fly   172 NLREKVGELETFKDILFGQIETLQRYFDACSEVNKNNAQPLDLGDGLKSIDFKGE-SITFRATTS 235
            :|:.|:.||..:.|:|..|:.|:|.:      |:::...|      ..|::...| |....||.:
Mouse   112 SLKTKMSELRLYCDLLMQQVHTIQEF------VHRDERHP------SPSVENMNEASSLLSATCN 164

  Fly   236 GVLTTLQHCLEIIAESDESWKRKLEREIDKRRRSED-QSKKLKDEVEKMKR-LSYPGPDFEEGPH 298
            ..:|||:.|::|.       ..|.:.|:.:....:. .|......|:.||| .|:||....|...
Mouse   165 TFITTLEECVKIA-------NAKFKPEMFQLPHPDPLVSPVSPSPVQMMKRSASHPGSCSSERSS 222

  Fly   299 STLPE 303
            .::.|
Mouse   223 CSIKE 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
certNP_001286978.1 PH 40..130 CDD:278594 31/87 (36%)
PH_GPBP 42..142 CDD:270100 36/99 (36%)
START_STARD11-like 363..601 CDD:176881
Plekha3NP_112546.1 PH_FAPP1_FAPP2 1..100 CDD:269951 37/100 (37%)
Interaction with SACM1L. /evidence=ECO:0000250|UniProtKB:Q9HB20 1..100 37/100 (37%)
Interaction with VAPA and VAPB. /evidence=ECO:0000250|UniProtKB:Q9HB20 97..297 36/167 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..297 9/30 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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