DRSC/TRiP Functional Genomics Resources

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Protein Alignment cert and AT4G39670

DIOPT Version :9

Sequence 1:NP_001286978.1 Gene:cert / 38928 FlyBaseID:FBgn0027569 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_195677.2 Gene:AT4G39670 / 830121 AraportID:AT4G39670 Length:229 Species:Arabidopsis thaliana


Alignment Length:206 Identity:39/206 - (18%)
Similarity:78/206 - (37%) Gaps:55/206 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 ESDELRFD------VVVNNLNNWCLRAETSEDRMHWV-DVLQLYKADSGSTDTTSLRRHGSTMSL 153
            :.||||.|      ..|:.|.| ||........|.:: .|..|.:| |.:.:|..     :.:.|
plant    51 DEDELRLDDFCSACTHVSVLFN-CLGFAFKFAEMEYIAKVKDLVEA-SKTFETLH-----NILDL 108

  Fly   154 QSNTISLTSGGSLKKTQRNLREKVGELET-FKDILFGQIETLQ-----RYFDACSEVNKNNAQPL 212
            .....::.:.||..:..|.:|:.:..:.. |:..|.....:|:     .|.:.|:..:       
plant   109 DVEKETVKTPGSHSRNLRRVRQGLDLIRAIFEQFLIADDYSLKDAATTAYTEVCAPFH------- 166

  Fly   213 DLGDGLKSIDFKGESITFRATT---SGVLT--TLQHCLEIIAESDESWKRKLEREIDKRRRSEDQ 272
                            |:...|   :|:.|  |....|..:.|:|:|.::.:       ||..:.
plant   167 ----------------TWAVRTAVYAGMYTLPTRDQLLLRLNETDQSVEKNM-------RRYMEA 208

  Fly   273 SKKLKDEVEKM 283
            |:.:.:.::|:
plant   209 SRPIIEYIDKL 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
certNP_001286978.1 PH 40..130 CDD:278594 12/40 (30%)
PH_GPBP 42..142 CDD:270100 15/52 (29%)
START_STARD11-like 363..601 CDD:176881
AT4G39670NP_195677.2 GLTP 58..192 CDD:370081 28/163 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10219
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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