DRSC/TRiP Functional Genomics Resources

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Protein Alignment cert and cert1a

DIOPT Version :9

Sequence 1:NP_001286978.1 Gene:cert / 38928 FlyBaseID:FBgn0027569 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001017914.3 Gene:cert1a / 796455 ZFINID:ZDB-GENE-080724-10 Length:620 Species:Danio rerio


Alignment Length:644 Identity:276/644 - (42%)
Similarity:391/644 - (60%) Gaps:91/644 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 AGSQSQSDASEEEEYLDNSIELRGYLSKWTNYIYGWQPRYIVLKDGTLSYYKSESESDFGCRGAI 85
            :.|.|..|...|.|.||   ||.|.||||||||:|||.|:|.||...||||:|..|.::||||:|
Zfish     5 SSSGSDEDLDPESELLD---ELGGKLSKWTNYIHGWQDRWIALKGNILSYYRSADEKEYGCRGSI 66

  Fly    86 SLTKATIKAHESDELRFDVVVNNLNNWCLRAETSEDRMHWVDVLQLYKADSGSTDTTSLRRHGST 150
            .|:||.|..||.||.|||:.||: :.|.||||....|..|:|.::|:||:||....:|||||||.
Zfish    67 CLSKAVITPHEFDECRFDISVND-SIWYLRAEHPLLRQQWIDTIELHKAESGYGSESSLRRHGSL 130

  Fly   151 MSLQS--NTISLTSGGSLKKTQRNLREKVGELETFKDILFGQIETLQRYFDACSE---------- 203
            :||.|  :.:|..|..||||.. :|:||:.|:|||:|||..|::|||:|||.|::          
Zfish   131 LSLTSAASGLSTASASSLKKAY-SLQEKLAEMETFRDILCRQVDTLQKYFDNCADTESKDELHRD 194

  Fly   204 -------------------VNKNNA--QPLDLGDGLK---SIDFKGESITFRATTSGVLTTLQHC 244
                               :|.||:  :.....:.||   .||||||:|||:|||:|:|:||.||
Zfish   195 KVSDEEEDFPTLRPDADYLLNNNNSSKEKSFFVNTLKDPAGIDFKGEAITFKATTAGILSTLSHC 259

  Fly   245 LEIIAESDESWKRKLEREIDKRRRSEDQSKKLKDEVEKMKRLSYPGPDFEEGPHSTLPEDEFFDA 309
            ::|:.:.:|||:::|::||::|||:||..|....|::  |:..|.|||:||||:|.:.|:|||||
Zfish   260 IDILVKREESWQKRLDKEIERRRRAEDAYKAALTELK--KKPHYGGPDYEEGPNSLINEEEFFDA 322

  Fly   310 VETGLDK---IEEDMQLRFKLKLQSQIS-----------QTLVNVPH---------EAVAEGEEA 351
            ||..|||   |||..|:. :.:...|||           |..:..||         :.::..::.
Zfish   323 VEAALDKHDQIEEQSQVE-RSRASRQISLTPDTFSSISTQKYLTKPHSHTSSLSSVDLISASDDV 386

  Fly   352 REEFGTGAEATSHALWPEIDRVCKEQLHYAREGVGQDGNGWQIFADEGEIKMYKREEEVNGLVMD 416
                        |....:::.:....:.|:.:.||.|.| ||:..:||::|:|:||.|.||:|:|
Zfish   387 ------------HRFSAQVEEMVHSHMTYSLQDVGGDAN-WQLVVEEGDMKVYRREVEENGIVLD 438

  Fly   417 PLKAYHTVQGVTAREMCHYFFMPEFRNDWETTLEDCTILEKISADTLLFLQTHKRIWPASQRDAQ 481
            ||||.|.|:|||..|:||||:...:|||||||:|...::|.:|....:..||.||:|||||||..
Zfish   439 PLKATHAVKGVTGHEVCHYFWDTAYRNDWETTVESFQVVETLSDQACIIHQTLKRVWPASQRDVL 503

  Fly   482 FWSHMRKI--TDNLEPGARDMWVVCNNSTEYAKQESKNGKCVRIFLTVILACQTHL--PEGYVKG 542
            :.|.||||  |:..:|   |.|:|||.|.::....... :|:|..:.|.:.|||.:  |||   .
Zfish   504 YVSVMRKILSTNENDP---DTWLVCNFSVDHDGYPPST-RCIRAKINVAMICQTLISPPEG---D 561

  Fly   543 QPLNRNDLTCKITYCSVVNPGGWAPASALRAVYKREYPKFLKRFTGYVIDQCKDKPIMF 601
            :.::|:::.|||||.:.||||||||||.||||.||||||||||||.||.::...:.|:|
Zfish   562 KEISRDNIICKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYVQEKTSSEAILF 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
certNP_001286978.1 PH 40..130 CDD:278594 50/89 (56%)
PH_GPBP 42..142 CDD:270100 54/99 (55%)
START_STARD11-like 363..601 CDD:176881 111/241 (46%)
cert1aNP_001017914.3 PH_GPBP 23..122 CDD:270100 54/99 (55%)
FFAT. /evidence=ECO:0000250|UniProtKB:Q9Y5P4 318..324 5/5 (100%)
START_STARD11-like 387..620 CDD:176881 111/240 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579592
Domainoid 1 1.000 220 1.000 Domainoid score I2560
eggNOG 1 0.900 - - E1_KOG1739
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 482 1.000 Inparanoid score I1419
OMA 1 1.010 - - QHG52378
OrthoDB 1 1.010 - - D408116at33208
OrthoFinder 1 1.000 - - FOG0006557
OrthoInspector 1 1.000 - - otm25503
orthoMCL 1 0.900 - - OOG6_106305
Panther 1 1.100 - - O PTHR10219
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4792
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.810

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