DRSC/TRiP Functional Genomics Resources

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Protein Alignment cert and def6c

DIOPT Version :9

Sequence 1:NP_001286978.1 Gene:cert / 38928 FlyBaseID:FBgn0027569 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_692142.2 Gene:def6c / 563690 ZFINID:ZDB-GENE-060503-87 Length:620 Species:Danio rerio


Alignment Length:381 Identity:82/381 - (21%)
Similarity:154/381 - (40%) Gaps:87/381 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AAGSQSQSDASE------EEEYLD--NSIELRGYLSKWTNYIYGWQPRYIVLKDGTLSYYKSESE 76
            :||.....::.|      :|.:::  :||..:|||.|..:....||.|:.|||.|:|.||.:|.:
Zfish   185 SAGQLLHVESKEAFSLAVDEVFMEMYHSIIKKGYLVKKGHVRRNWQERWFVLKPGSLIYYVAEDQ 249

  Fly    77 SDFGCRGAISLTKATIKAHESD-ELR--FDVVVNNLNNWCLRAETSEDRMHWVDVLQL---YKAD 135
            .:  .:|.|.|.::::.....| |.|  ...|..::..:.:.|...:.|:.|:..:|:   .:|:
Zfish   250 KE--KKGEILLEESSVVESVPDKEGRRCLFCVKTSVRTYEMSASNLKQRVDWMQAIQMAFRLRAE 312

  Fly   136 SGSTDTTSL----RRHGSTMS-LQSNTISLTSGGSLKKTQRNLREKVGELETFKDILFGQIETL- 194
            ..|:....|    |:...|:. .|||..:.....:::.:|.:..|:.||.|:.:.    .||:: 
Zfish   313 GKSSLHQDLKLSRRKQRETLQRSQSNQSTHNESSAVEASQHSAPEQQGETESLEQ----HIESII 373

  Fly   195 --QRYFDA-CSEVNKNNAQPLDLGDGLKSIDFKGESITFRATTSGVLTTLQHCLEIIAESDESWK 256
              ||..:| |.|..|.                                  :|      |..::.:
Zfish   374 QKQREVEAKCKEEEKQ----------------------------------EH------EKQQAIQ 398

  Fly   257 RKLEREIDKRRRSEDQ--------SKKLKDEVEKMKRLSYPGPDFEEG----PHSTLPEDEFFDA 309
            |.||:::::.:.:.::        .|:::...:::..|.......||.    .|:.|.||.....
Zfish   399 RDLEKQLEEAKEANEKMTMTLTEMEKEVQQHKKRINELELTQVKLEEALNTQIHARLEEDRARQE 463

  Fly   310 VETGLDKIEEDMQLRFKLKLQSQISQTLVNVPHEAVAEGEEAREEFGTGAEATSHA 365
            :|..|  .||..:|...|.||.|:....|.|..|.....:.:.|    .|..:.||
Zfish   464 LERQL--AEEQKKLADLLLLQQQMQTASVRVQVEPQINDDTSVE----AAPISQHA 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
certNP_001286978.1 PH 40..130 CDD:278594 26/92 (28%)
PH_GPBP 42..142 CDD:270100 28/105 (27%)
START_STARD11-like 363..601 CDD:176881 2/3 (67%)
def6cXP_692142.2 PH_SWAP-70 206..315 CDD:270092 29/110 (26%)
PH 213..306 CDD:278594 27/94 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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