DRSC/TRiP Functional Genomics Resources

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Protein Alignment cert and Plekha8

DIOPT Version :9

Sequence 1:NP_001286978.1 Gene:cert / 38928 FlyBaseID:FBgn0027569 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001102705.1 Gene:Plekha8 / 500132 RGDID:1563940 Length:520 Species:Rattus norvegicus


Alignment Length:595 Identity:130/595 - (21%)
Similarity:210/595 - (35%) Gaps:205/595 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LRGYLSKWTNYIYGWQPRYIVLKDGTLSYYKSESESDFGCRGAISLTKATIKAHESDELRFDVVV 106
            :.|.|.|||||:.|||||:.:|..|.||||.|..::..||:|:|.:....|:.|..|..|.|:::
  Rat     1 MEGVLYKWTNYLSGWQPRWFLLCGGILSYYDSPEDAWKGCKGSIQMAVCEIQVHSVDNTRMDLII 65

  Fly   107 NNLNNWCLRAETSEDRMHWVDVLQLYKADSGSTDTTSLRRHGSTMSLQSNTISLTSGGSLKKTQR 171
            .....:.|:|.:..:|..|  ::.|..|.:..||:    |.........||             .
  Rat    66 PGEQYFYLKARSVAERQRW--LVALGSAKACLTDS----RTQKEKEFAENT-------------E 111

  Fly   172 NLREKVGELETFKDILFGQIETLQRYFDACSEVNKNNAQPLDLGDGLKSIDFKGESITFRATTSG 236
            ||:.|:.||..:.|:|..|::..:....|            .:.|..:.||.   ....|:|.:.
  Rat   112 NLKTKMSELRLYCDLLVQQVDKTKEVATA------------GVADSEEGIDV---GTLLRSTCNT 161

  Fly   237 VLTTLQHCLEI--IAESDE----------------SWKRK---------LEREID---------- 264
            .|.||:.|::|  .|.:.|                |.|.|         |||.|:          
  Rat   162 FLKTLEECMQIANAAFTSELLYHTPPGSPQLAVLKSSKMKHPIIPIHNSLERPIELNSCENGSLS 226

  Fly   265 -----------KRRRSEDQSKKLKDEV----------------EKMKR------------LSYPG 290
                       |.::|....|..|.:.                |:||.            |:.||
  Rat   227 VEVNGDEELLMKTKKSSLYLKSTKADCNISSEENTDGNTTVQGERMKEDGEENLESHDRDLAQPG 291

  Fly   291 PDFEEGPHSTLPEDE-----FFDAVETGLDKIE--EDMQLRFKLKLQSQISQTLVNVPHEAVAEG 348
            .|....|.|...:.|     ||..:.|....||  ||.                 .:|.||..  
  Rat   292 SDSVCSPESPWEDSEEVIPTFFSTMNTSFSDIELLEDS-----------------GIPTEAFL-- 337

  Fly   349 EEAREEFGTGAEATSHALWPEIDRVCKEQLHYAREGVGQDGNGWQIFADEGEIKMYKREEEVNGL 413
                        |:.:|:.|.:|::                 |..:||   .:||     ::.|.
  Rat   338 ------------ASCYAVVPVLDKL-----------------GPTVFA---PVKM-----DLVGN 365

  Fly   414 VMDPLKAYHTVQGVTAREMCHYFFMPEFRNDWETTLEDCTILEKISADTLLFLQ--THKRIWPAS 476
            :....:.|     :|.:|        ||     |||:. .:|.::.||......  |...:|  .
  Rat   366 IKKVNQKY-----ITNKE--------EF-----TTLQK-IVLHEVEADVARVRNSATEALLW--L 409

  Fly   477 QRDAQFWSHMRKITDNLEPGARDMWVVCNNSTEYAKQ-ESKNGKCVR-IFLTVILACQTHLPEGY 539
            :|..:|   ::.....::.|.:|:....||:  |.|. ...:|..|| :|...:.|..::  |.:
  Rat   410 KRGLKF---LKGFLTEVKNGEKDIQTALNNA--YGKTLRQHHGWVVRGVFALALRAAPSY--EDF 467

  Fly   540 VKGQPLNRND 549
            |....:...|
  Rat   468 VAALTIKEGD 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
certNP_001286978.1 PH 40..130 CDD:278594 32/87 (37%)
PH_GPBP 42..142 CDD:270100 36/99 (36%)
START_STARD11-like 363..601 CDD:176881 38/191 (20%)
Plekha8NP_001102705.1 PH_FAPP1_FAPP2 1..100 CDD:269951 36/104 (35%)
PH 1..93 CDD:278594 34/93 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..303 9/47 (19%)
Glycolipid transfer protein homology domain 311..520 49/251 (20%)
GLTP 334..471 CDD:285880 40/203 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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