DRSC/TRiP Functional Genomics Resources

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Protein Alignment cert and plekha8

DIOPT Version :9

Sequence 1:NP_001286978.1 Gene:cert / 38928 FlyBaseID:FBgn0027569 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001007375.1 Gene:plekha8 / 492502 ZFINID:ZDB-GENE-041114-69 Length:549 Species:Danio rerio


Alignment Length:590 Identity:133/590 - (22%)
Similarity:233/590 - (39%) Gaps:115/590 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LRGYLSKWTNYIYGWQPRYIVLKDGTLSYYKSESESDFGCRGAISLTKATIKAHESDELRFDVVV 106
            :.|.|.||||||.|||||:.||:.||||||.|:.::..||:|:|.::...|:.|.||..|.|:::
Zfish     1 MEGVLYKWTNYISGWQPRWFVLEGGTLSYYDSQEDAWKGCKGSIKISVCEIQVHPSDFTRVDLII 65

  Fly   107 NNLNNWCLRAETSEDRMHWVDVLQLYKADSGSTDTTSLRRHGSTMSLQSNTISLTSGGSLKKTQR 171
            .....:.|||..:.:|..|:..|...||  ..||..:.|.    ..||.|:             .
Zfish    66 PGEQYFYLRAINAAERQKWLVALGTAKA--CLTDNRTKRE----KELQENS-------------E 111

  Fly   172 NLREKVGELETFKDILFGQIETLQRYFDACSEVNKNNAQPLDLGDGLKSIDFKGESITFRATTSG 236
            .|:.|:.||..:.|:|..|:..:|.     |.:.:.:|...:.||...::        .::|.:.
Zfish   112 ALKTKMSELRLYCDLLLQQVNKIQE-----SPLAETSAGSGEGGDETGNL--------VKSTCTT 163

  Fly   237 VLTTLQHCLEIIAE---------------SDESWKRKLEREIDKRRRSEDQSKKLKDEVEKMKRL 286
            .|.||:.|:.|.:.               |..:.|.:..:..|.:.....:::  ||.:......
Zfish   164 FLKTLEECMHIASRTFNPDLLSRTPPGSPSVATIKPQKIKSNDPKNLHPGETR--KDLINTSGTS 226

  Fly   287 SY-PGPDFEEGPHSTLPEDEFFDA-VETGLDKIEEDMQLRFKLKLQSQISQTLVNVPHEAVAEGE 349
            :: .|||.|..|.   |::....| .|:||.:.:.|:       ::.....:.....||   |..
Zfish   227 AHESGPDNEPPPS---PQENISTAHTESGLMEDQNDL-------IEPNNGSSSSTQDHE---EPV 278

  Fly   350 EAREEFGTGAEAT-SHALWPEIDRVCKEQLHYAREGVGQDGNGWQIFADEGEIKMYKREEEVNGL 413
            |.::..|:..:|. |.....|:.....:.....:|.:..|   .::...:.|.|..:.:|     
Zfish   279 EEQQTDGSTEDADHSQEEQQEVSMSPTQNKQEVQEDIQTD---LELNETQSENKQEEEDE----- 335

  Fly   414 VMDPLKAYHTVQGVTAREMCHYFFMPEFRND----WETTLEDC----TILEKISADTLL-----F 465
              |.:..:.:.       |.|.|.......|    .:..|:.|    .:|:|:......     |
Zfish   336 --DKVDTFFST-------MSHRFSDIILEEDSGIPTQAFLDSCYAIVPVLDKLGPTVFAPVKIDF 391

  Fly   466 LQTHKRIWPASQRDAQFWSHMRKITDNLEPGARDMWVVCNNSTEYAKQESKNGKCVRIFLTVILA 530
            :...|:|......|.:.:..::.|.  |.....::..|.|::||......:..|.::.||:.|  
Zfish   392 VGNIKKIQQKVVSDPESFPTLQSIV--LHEVKTEVAQVRNSATEALLWLKRGLKFLKEFLSEI-- 452

  Fly   531 CQTHLPEGYVKGQPLNRNDLTCKITYCSVVNPGGWAP----ASALRAVYKREYPKFLKRFTGYVI 591
             .|.:.:  |:|...|....|.:..:       ||..    |.||||.  ..|..|:.....|..
Zfish   453 -NTGVKD--VQGALYNAYGKTLRQYH-------GWVVRGVFALALRAA--PSYEGFMAALVSYEG 505

  Fly   592 DQCKD 596
            |:.|:
Zfish   506 DELKE 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
certNP_001286978.1 PH 40..130 CDD:278594 37/87 (43%)
PH_GPBP 42..142 CDD:270100 42/99 (42%)
START_STARD11-like 363..601 CDD:176881 47/251 (19%)
plekha8NP_001007375.1 PH_FAPP1_FAPP2 1..100 CDD:269951 42/100 (42%)
PH 1..88 CDD:278594 37/86 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..312 24/146 (16%)
GLTP 363..500 CDD:285880 32/152 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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