DRSC/TRiP Functional Genomics Resources

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Protein Alignment cert and Osbp

DIOPT Version :10

Sequence 1:NP_648199.1 Gene:cert / 38928 FlyBaseID:FBgn0027569 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_477271.1 Gene:Osbp / 42985 FlyBaseID:FBgn0020626 Length:784 Species:Drosophila melanogaster


Alignment Length:551 Identity:125/551 - (22%)
Similarity:207/551 - (37%) Gaps:110/551 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ELRGYLSKWTNYIYGWQPRYIVLKDGTLSYYKSESESDFGCRGAISLTKATIKAHESDELRFDVV 105
            |::|:|.||||||.|:|.|:.||..|.||||:::||.:..|||.|||..|.|  |..|...|.:.
  Fly    16 EMKGWLLKWTNYIKGYQRRWFVLSKGVLSYYRNQSEINHTCRGTISLHGALI--HTVDSCTFVIS 78

  Fly   106 VNNLNNWCLRAETSEDRMHWVDVLQLYKADSGSTDTTSLRRHGSTMSLQSNTISLTSGGSLKKTQ 170
            ......:.::|.|..:|..||..|:|.||       .::|........::.|..:.....:....
  Fly    79 NGGTQTFHIKAGTEVERQSWVTALELAKA-------KAIRAIECEEEEETETAHVVPSQEISSVV 136

  Fly   171 RNLREKVGELETFKDILFGQIETLQRYFDACSEVNKNNAQPLDLGDGLKSIDFKGESITFRATTS 235
            |:|.:::..:.|..|::......|||   |.:::..|..:  .||...|.::.:  :..||.|::
  Fly   137 RDLTDRLESMRTCYDLITKHGAALQR---ALNDLETNEEE--SLGSRTKIVNER--ATLFRITSN 194

  Fly   236 GVLTTLQHCLEIIAESDESWKRKLEREIDKRRRSE---DQSKKLKDEVEKM-------KRLSYPG 290
            .::......|.........|.:.|..|.::|:|.|   :|..|.:.::|:.       |.:|...
  Fly   195 AMINAGNDYLHTAEAQGHKWSKMLHHEREQRQRLEEIIEQMAKQQSQMEQAAVLVRQNKPVSSTS 259

  Fly   291 PDFEEGPHSTLPED-EFFDAVE---TGLDKIEEDMQLR---FKLKLQSQISQTLVNVPHEAVAEG 348
            .....|...|..|: |||||.|   :|..:..|.....   |.||:..:.|.:...|........
  Fly   260 GAGTAGSLVTSDEEMEFFDAEEHGYSGSGRSPESSDCERGTFILKMHKRRSSSEDQVEGHLEGSS 324

  Fly   349 EEAREEFGTGAEATSHALWPEIDRVCKEQL-HYAREGVGQD------------------GNGWQI 394
            .|:.|:..|         ...:.:||.... ..|..|.|.|                  |..|  
  Fly   325 SESDEQKRT---------VQTVQQVCLVSAPRVASGGQGDDDDDVDKALPAKESTDSIYGRNW-- 378

  Fly   395 FADEGEIKMYKREEEVNGLVMDPLKAYHTVQGVTAREMCHYFFMPEFR----------NDWE--- 446
              :...||  ||.:.|......|:..:..::....:::........|.          .|:|   
  Fly   379 --NPDLIK--KRRDRVPDKPNHPISLWGIMKNCIGKDLSKIPMPINFNEPLSMLQRLVEDYEYTE 439

  Fly   447 ------TTLEDCTILEKISADTL-LFLQTHKR-----------IWPASQRDAQFWSHMRKITDNL 493
                  |..::|..|..|:|.|: .:..|..|           .:...:.|...|..:.:...:.
  Fly   440 ILDYAATCQDECEQLAYIAAFTVSAYATTTNRTGKPFNPLLGETYECDRMDDYGWRCLAEQVSHH 504

  Fly   494 EPGARDMWVVCNNSTEYAKQESKNGKCVRIF 524
            .|.|.   :.|         ||||..|.:.|
  Fly   505 PPVAA---LHC---------ESKNWTCWQEF 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
certNP_648199.1 PH_GPBP 42..142 CDD:270100 40/99 (40%)
START_STARD11-like 363..601 CDD:176881 36/212 (17%)
OsbpNP_477271.1 PH_OSBP_ORP4 17..113 CDD:270101 41/104 (39%)
Oxysterol_BP 399..773 CDD:460126 22/137 (16%)

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