DRSC/TRiP Functional Genomics Resources

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Protein Alignment cert and Plekha8

DIOPT Version :9

Sequence 1:NP_001286978.1 Gene:cert / 38928 FlyBaseID:FBgn0027569 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001157833.1 Gene:Plekha8 / 231999 MGIID:2681164 Length:519 Species:Mus musculus


Alignment Length:597 Identity:133/597 - (22%)
Similarity:211/597 - (35%) Gaps:177/597 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LRGYLSKWTNYIYGWQPRYIVLKDGTLSYYKSESESDFGCRGAISLTKATIKAHESDELRFDVVV 106
            :.|.|.|||||:.|||||:.:|..|.||||.|..::..||:|:|.:....|:.|..|..|.|:::
Mouse     1 MEGVLYKWTNYLSGWQPRWFLLCGGILSYYDSPEDAWKGCKGSIQMAVCEIQVHSVDNTRMDLII 65

  Fly   107 NNLNNWCLRAETSEDRMHWVDVLQLYKADSGSTDTTSLRRHGSTMSLQSNTISLTSGGSLKKTQR 171
            .....:.|:|.:..:|..|  ::.|..|.:..||:    |.........||             .
Mouse    66 PGEQYFYLKARSVAERQRW--LVALGSAKACLTDS----RTQKEKEFAENT-------------E 111

  Fly   172 NLREKVGELETFKDILFGQIETLQRYFDACSEVN----KNNAQPLDLGDGLKSIDFKGESITFRA 232
            ||:.|:.||..:.|:|..|:       |...||.    .::.:.:|:|..|||            
Mouse   112 NLKTKMSELRLYCDLLVQQV-------DKTKEVATAGVTDSEEGIDVGTLLKS------------ 157

  Fly   233 TTSGVLTTLQHCLEIIAESDESWKRKLEREIDKRRRSEDQSKKLKDEVEKMKRLSYPGPDFEEGP 297
            |.:..|.||:.|::|   ::.::..:|   :........|...||.  .|||....|       .
Mouse   158 TCNTFLKTLEECMQI---ANAAFTSEL---LYHTPPGSPQLAVLKS--SKMKHPIIP-------I 207

  Fly   298 HSTLPEDEFFDAVETGLDKIE--EDMQLRFKLKLQSQISQTLV--------NVPHEAVAEGEEAR 352
            |::|......::.|.|...||  .|.::..|.|....:..|.|        |.......:||..:
Mouse   208 HNSLERSMELNSCENGSLSIEVNGDEEILMKTKSSLYLKSTEVDCSISSEENTDDNVTVQGEIMK 272

  Fly   353 EEFGTGAEATSH---ALWPEIDRVCKEQLHYAREGVGQDGNGWQIFADEGEIKMYKREEEVNGLV 414
            |:.....|  ||   ...|..|.||..:            :.|:            ..|||    
Mouse   273 EDGEENLE--SHDKDPAQPGSDSVCSPE------------SPWE------------DNEEV---- 307

  Fly   415 MDPLKAYHTVQGVTAREMCHYFFMPEFRNDWETTLEDCTILEKISADTLLFLQTHKRIWPASQR- 478
                                   :|.|.:...|:..|..:||.....|..||.:...:.|...: 
Mouse   308 -----------------------IPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKL 349

  Fly   479 -------------------------DAQFWSHMRKITDNLEPGARDMWVVCNNSTEYAKQESKNG 518
                                     :.:.::.::||.  |.....|:..|.|::||......:..
Mouse   350 GPTVFAPVKMDLVGNIKKVNQKYITNKEEFTTLQKIV--LHEVEADVAQVRNSATEALLWLKRGL 412

  Fly   519 KCVRIFLTVI----LACQTHLPEGYVKGQPLNRNDLTCKITYCSVVNPGGWAP----ASALRAVY 575
            |.::.|||.:    ...||.|...|  |:.|.::.              ||..    |.||||. 
Mouse   413 KFLKGFLTEVKNGEKDIQTALNNAY--GKTLRQHH--------------GWVVRGVFALALRAA- 460

  Fly   576 KREYPKFLKRFT 587
             ..|..|:...|
Mouse   461 -PSYEDFVAALT 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
certNP_001286978.1 PH 40..130 CDD:278594 32/87 (37%)
PH_GPBP 42..142 CDD:270100 36/99 (36%)
START_STARD11-like 363..601 CDD:176881 48/262 (18%)
Plekha8NP_001157833.1 PH_FAPP1_FAPP2 1..100 CDD:269951 36/104 (35%)
PH 1..93 CDD:278594 34/93 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..302 7/40 (18%)
Glycolipid transfer protein homology domain 330..473 32/162 (20%)
GLTP 333..470 CDD:285880 30/156 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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