DRSC/TRiP Functional Genomics Resources

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Protein Alignment cert and T28D6.7

DIOPT Version :9

Sequence 1:NP_001286978.1 Gene:cert / 38928 FlyBaseID:FBgn0027569 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001366874.1 Gene:T28D6.7 / 189042 WormBaseID:WBGene00012127 Length:268 Species:Caenorhabditis elegans


Alignment Length:243 Identity:47/243 - (19%)
Similarity:94/243 - (38%) Gaps:52/243 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 IDRVCKEQLHYAREGVGQDGNGWQIFADEGEIKMYKREE--------EVNGLVMDPLKAYHTVQG 426
            :.||.::..:...:.:.:|..||        :::||:::        |.:...|  :||...:..
 Worm     5 VARVWEDSDYEKVKNLCEDSEGW--------VEVYKKKDITICTQNIEKSSYQM--IKAIAQLPD 59

  Fly   427 VTAREMCHYFFMPEFRNDWETTLEDCTILEKISADTLLFLQTHKRIWPASQRD---AQFWSHMRK 488
            |:|..:........:|..|:..:.....:..|:.:..:...:...:.|...||   .:.|....|
 Worm    60 VSATVVYDVLHDSAYRAKWDKYMIKQETIGTINPNNDVCYYSLNSVSPIRPRDFVMQRSWLETDK 124

  Fly   489 ITDNLEPGARDMWVVCNNSTEYAKQESKNGKCVRIFLTVILACQTHLPEGYVKGQPLNRNDLTCK 553
              |.|         :|::|..:.......| |:|  .||:::       ||:    :...:..|:
 Worm   125 --DRL---------ICSHSVCHEDYPPAKG-CIR--ATVLIS-------GYL----IKEKEQGCE 164

  Fly   554 ITYCSVVNPGGWAPASALRAVYKREYPKFLKRF----TGYVIDQCKDK 597
            :.|.|..:|.|..|...:..|.|...||.:|:.    .||  .:.|:|
 Worm   165 VIYISHSDPKGKLPTWLVNRVTKVVAPKVIKKLHKACLGY--PEWKEK 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
certNP_001286978.1 PH 40..130 CDD:278594
PH_GPBP 42..142 CDD:270100
START_STARD11-like 363..601 CDD:176881 47/243 (19%)
T28D6.7NP_001366874.1 START_STARD10-like 3..223 CDD:176880 47/243 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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