DRSC/TRiP Functional Genomics Resources

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Protein Alignment cert and osbpl3

DIOPT Version :9

Sequence 1:NP_001286978.1 Gene:cert / 38928 FlyBaseID:FBgn0027569 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_012819861.2 Gene:osbpl3 / 100379686 XenbaseID:XB-GENE-950902 Length:912 Species:Xenopus tropicalis


Alignment Length:729 Identity:134/729 - (18%)
Similarity:216/729 - (29%) Gaps:273/729 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EAAAGSQSQSDASEEEEYLDNSIELRGYL---SKWTNYIYGWQPRYIVLKDGTLSYYKSESESD- 78
            |...|.:|.::..:|.|      :..|:|   .||.  :.||..||..|..|.|.|.||:::.: 
 Frog    99 EIVEGLRSSTNYVQEPE------KQEGFLLKKRKWP--LKGWHKRYFFLDKGILKYSKSQADMER 155

  Fly    79 ---FGC----RGAISLTKAT--------------------------------------------- 91
               .||    ...:|:.|:|                                             
 Frog   156 GKLHGCIDVGLSVMSVKKSTKCIDLDTEEHIYHLKVKFPEVFEEWVLKLRDHRLYRQNEISVFPH 220

  Fly    92 ---------IKAHESDELRFDVVV--------------NNLNNWCLRAET-------SEDRMHWV 126
                     |...||....||.|.              |||...||..||       |.|.|. :
 Frog   221 DLNAPFFPMISTTESASSAFDTVPSPQDFNRKNSLKLGNNLPFSCLNNETRVPAWLQSSDEME-I 284

  Fly   127 DVLQLYKADSGSTDTTSLRR-----HGSTMSLQSNTISLTSGGSLKKTQRNLREKVGELETFKDI 186
            ...:|.:..|...:.::|.:     |.:..:...|.|.:.:..|.||.:...|.|.......||.
 Frog   285 CAKELSQCHSYIVEMSNLLQNMEVLHRTYSAPSINAIQIGTIESPKKEKGIHRRKWRSKGLNKDS 349

  Fly   187 LFGQIETLQRYFDACSEVNKNNAQPLDLGDGLKSIDFKGESITFRATTSGVLTTLQHCLEIIA-- 249
            . |.:: :...|.....::.:|       ..|.:||:..|......:.:..:|.:|..|..||  
 Frog   350 K-GSLQ-VPSAFSGVMRLHASN-------PNLSTIDYAEEKQYSGGSENSEVTKMQDSLCHIANK 405

  Fly   250 -------------ESDESWKRKLEREID--------KRRRSED----QSKKLKDEVEKMKRLSYP 289
                         ...|..|:.||.:..        |...|.|    :.|.|..::....|||. 
 Frog   406 AYFSLKSAYNTVFSEREKLKQFLEHDSSPSAPIAGLKNALSSDSPCEEGKTLVHQMSNESRLSI- 469

  Fly   290 GPDFEEGPHSTLPEDEFFDAVETGL------DKIEEDMQLRFKLKLQSQISQTLVNVPHEAVAEG 348
                      |....||:||.|..|      :::.:|         .|.:|....||..:.::..
 Frog   470 ----------TDSLTEFYDAQEVLLSSSSSENEVSDD---------DSYVSDISDNVSEDNLSND 515

  Fly   349 EEAREEFGTGAEATS------H--------------ALWPEIDRVCKEQLHYAREGVGQD----G 389
            .::......|...|:      |              :||           :..|..:|:|    .
 Frog   516 IDSERLSLNGGSVTTVDGCYKHRTCLLAPCPNTSNISLW-----------NILRNNIGKDLSRVS 569

  Fly   390 NGWQIFADEGEIKMYKREEEVNGLV------MDPLK--AYHTVQGVTAREMCHYF-----FMPEF 441
            ...|:......::....|.|.:.|:      .||.:  .|.....|:|.....|.     |.|..
 Frog   570 MPVQLNEPLSTLQRLCEELEYSSLLDKAAHTPDPFERMVYVATFAVSAYASSFYRAGSKPFNPVL 634

  Fly   442 RNDWETTLED---CTILEKIS-----------ADTLLFLQTHK---RIWPASQRDAQF------- 482
            ...:|...||   ..|.|::|           ::..:|.|..:   :.|..|....|.       
 Frog   635 GETYEFIKEDQGFRFISEQVSHHPPISACHADSENFVFFQDMRWKNKFWGKSMEIVQIGTTHLIL 699

  Fly   483 --------WSHMRKITDNLEPGARDMWV--------------VCNNSTEYAKQE----------- 514
                    |:.:.....|:..|.|  |:              .|:....:.|.:           
 Frog   700 PGFGDHYEWNKVTSCIHNILSGQR--WIEHYGEIIIKNTKSDTCHCKVTFVKAKYWNPNVHEIEG 762

  Fly   515 ---SKNGKCV-RIF 524
               .:|||.| |||
 Frog   763 TVMDRNGKVVHRIF 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
certNP_001286978.1 PH 40..130 CDD:278594 35/175 (20%)
PH_GPBP 42..142 CDD:270100 37/185 (20%)
START_STARD11-like 363..601 CDD:176881 43/260 (17%)
osbpl3XP_012819861.2 PH_ORP3_ORP6_ORP7 96..216 CDD:270104 24/124 (19%)
Oxysterol_BP 552..896 CDD:395990 42/238 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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