DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4E3 and LSP1

DIOPT Version :10

Sequence 1:NP_648194.1 Gene:eIF4E3 / 38923 FlyBaseID:FBgn0265089 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_198412.1 Gene:LSP1 / 833534 AraportID:AT5G35620 Length:198 Species:Arabidopsis thaliana


Alignment Length:194 Identity:64/194 - (32%)
Similarity:98/194 - (50%) Gaps:22/194 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 MSGNEEELQPSLNRVMKNIDYDLAMKHPLEHTWTLWHLENDRTK--RWAEMLVDVTSFNTVEDFF 103
            :...|.|.||                |.||..|:.| .:|...|  .|...|....:|:|||||:
plant    16 LPATEAEKQP----------------HKLERKWSFW-FDNQSKKGAAWGASLRKAYTFDTVEDFW 63

  Fly   104 SVYYFVKPPSDLKIFNDYMVFKKNIRPMWEDDTNKNGGRWILLLDKASRTYIDKMWHDLLLCMIG 168
            .::..:...|.|....:..:||..:.|.|||....|||:|..::....:..:||.|.:.|:.:||
plant    64 GLHETIFQTSKLTANAEIHLFKAGVEPKWEDPECANGGKWTWVVTANRKEALDKGWLETLMALIG 128

  Fly   169 ECFQHSDEICGVVINVR--NKANKLSLWTKDSRNVEAILSIGRQIKELLHLGIMEIQYQVHKDA 230
            |.|..:|||||||.:||  :|.:||||||:...|...::.||::.||:|.: ..:|.:..|.|:
plant   129 EQFDEADEICGVVASVRPQSKQDKLSLWTRTKSNEAVLMGIGKKWKEILDV-TDKITFNNHDDS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4E3NP_648194.1 IF4E 68..224 CDD:460281 57/159 (36%)
LSP1NP_198412.1 IF4E 27..185 CDD:460281 57/159 (36%)

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