DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KRT86 and ifc-2

DIOPT Version :9

Sequence 1:XP_005268923.1 Gene:KRT86 / 3892 HGNCID:6463 Length:563 Species:Homo sapiens
Sequence 2:NP_001362085.1 Gene:ifc-2 / 180414 WormBaseID:WBGene00002056 Length:1339 Species:Caenorhabditis elegans


Alignment Length:494 Identity:107/494 - (21%)
Similarity:190/494 - (38%) Gaps:104/494 - (21%)


- Green bases have known domain annotations that are detailed below.


Human   130 GFRAGSCGRSFGYRSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKQEEKEQIKSLNSRF 194
            |..:|:....||....|:......|.|.:                  :..::.||.:|..||.|.
 Worm   733 GLASGTYASGFGQLVSGMSSAGAICTTQI------------------RDAREREKREIGLLNDRL 779

Human   195 AAFIDKVRFLEQQNKLLETKLQFYQNRECCQSNLEPLFEGYIETLRREAECVEADSGRLASELNH 259
            |.:|:||||||.||:.|...:...:|......::..||:..|...:...|...|.......::..
 Worm   780 ADYIEKVRFLEAQNRCLSHDIDILRNGFSGGGHVSGLFDAEINQAKHILEQTTAHRSTFERDITG 844

Human   260 VQEVLEGYKKKY------------------------EEEVSL----RATAENEFVALKKDVDCAY 296
            :...:|.::||:                        |.|:||    ....|.:.:.::::.|..|
 Worm   845 LSAEIEVFRKKWLDAVNAVKAHREDHDVDLDRLAKIEAEISLFKRKIRIVEEDVIRIRRENDGIY 909

Human   297 --------------LRKSDLEANVEALIQEIDFLRRLYEEEIRVLQSHISDTSVVVKLDNSRDLN 347
                          ..|::...||..|:|.|:.|:.  |..:|:.|.     .|.::.|.:.| |
 Worm   910 NEIARIKQLTHNEIALKNERSLNVSDLLQRINLLQT--ENNVRIEQE-----LVFIRRDTTAD-N 966

Human   348 MD-------CIIAEIKAQYDDIVTRSRAEAESWYRSKCEEMKATVIRHGETLRRTKEEINELNRM 405
            .|       ..|.:|:|.|:.|..|:|.:.|.|||.:..:::...:|....|  .|||:..:...
 Worm   967 RDYFRHELQAAIRDIRADYEAISIRNRQDIEVWYREQIRKIQDESVRVNPDL--YKEELISIRTT 1029

Human   406 IQRLTAEVENAKCQNSKLEAAVAQSEQQGEAALSDARCKLAELEGALQKAKQDMACLIREYQEVM 470
            :..:.:.:...:.:|..||..:...:...||...:  ..|||.:..:...:.....|..:.:::.
 Worm  1030 VTNVRSRLAEVEGRNFFLERLIDDLKNNEEAKFFE--ISLAERDAQIATLRDQCTELSIQMEKLC 1092

Human   471 NSKLGLDIEIATYRRLLEGEEQRLCEGVGSVNVCVSSSRG---GVVCGDLCASTTAPVVS----T 528
            ::::.|..||..||.||.|         .:|....|::.|   |:..|.:...:|. |:|    |
 Worm  1093 DNEISLRAEIERYRILLNG---------ANVTTYTSNTHGSGSGIAVGGVVGGSTR-VISQTTRT 1147

Human   529 RVSSVPSNSNV--------VVGTTNACAPSARVGVCGGS 559
            ..||..|.|||        :.|.....:....:|..|.|
 Worm  1148 HSSSNTSYSNVPASRGGYSISGNVGGISVGGTIGSHGAS 1186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KRT86XP_005268923.1 Keratin_2_head <80..179 CDD:292825 7/48 (15%)
Filament 182..493 CDD:278467 81/359 (23%)
Prefoldin 302..417 CDD:298833 30/121 (25%)
RILP-like <392..>460 CDD:304877 12/67 (18%)
ifc-2NP_001362085.1 Filament 768..1111 CDD:365827 80/354 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 181 1.000 Domainoid score I2296
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46601
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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