DRSC/TRiP Functional Genomics Resources

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Protein Alignment UbcE2M and CG5823

DIOPT Version :10

Sequence 1:NP_648187.1 Gene:UbcE2M / 38916 FlyBaseID:FBgn0035853 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_650631.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster


Alignment Length:130 Identity:36/130 - (27%)
Similarity:55/130 - (42%) Gaps:23/130 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KKASAAQLRIQKDINELN---LPNTCATDFPDPNDLLNFKLII-----SPDEGFYRDGRFVFNFR 78
            :|...|..|:::|...|.   ||...|.  |.||::|.:...:     ||..|.|..|..:|   
  Fly    10 RKQPTAVSRMKQDYMRLKRDPLPYITAE--PLPNNILEWHYCVKGPEDSPYYGGYYHGTLLF--- 69

  Fly    79 VGSNYPHEPPKVKCATQVYHPN--IDLDGNVCLNIL---REDWNPVLNINSIVYGLQFLFLEPNP 138
             ...:|.:||.:...|    ||  ...:..:||:|.   .:.|||...:.:|:.||....||..|
  Fly    70 -PREFPFKPPSIYMLT----PNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLESTP 129

  Fly   139  138
              Fly   130  129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbcE2MNP_648187.1 UBCc_UBE2F_UBE2M 26..163 CDD:467414 35/126 (28%)
CG5823NP_650631.1 UBCc_UBE2J 18..149 CDD:467419 34/122 (28%)

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