DRSC/TRiP Functional Genomics Resources

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Protein Alignment UbcE2M and Ubc4

DIOPT Version :10

Sequence 1:NP_648187.1 Gene:UbcE2M / 38916 FlyBaseID:FBgn0035853 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_524010.2 Gene:Ubc4 / 39133 FlyBaseID:FBgn0015321 Length:199 Species:Drosophila melanogaster


Alignment Length:175 Identity:46/175 - (26%)
Similarity:78/175 - (44%) Gaps:35/175 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ASAAQLRIQKDINE-------------LNLPNTCATDFPDPNDLLNFKLIISPDEGFYRDGRFVF 75
            |:.|..||:::..|             :.|.|...|:....        |..|.:..|..|:||.
  Fly     2 ANMAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGE--------IAGPPDTPYEGGKFVL 58

  Fly    76 NFRVGSNYPHEPPKVKCATQVYHPNI-DLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPE 139
            ..:|...||..||||:..|:::|||| .:.|.:||:||:::|...:.:.:::..||.|.....|:
  Fly    59 EIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPD 123

  Fly   140 DPLN-------KEAADVLQTNRRQFENNVKKAMRGGCVGETYFEC 177
            ||.:       |:..|:.....:.:.|    |..||  ..|:.:|
  Fly   124 DPQDAVVAYQFKDKYDLFLLTAKHWTN----AYAGG--PHTFPDC 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UbcE2MNP_648187.1 UBCc_UBE2F_UBE2M 26..163 CDD:467414 40/157 (25%)
Ubc4NP_524010.2 UBCc_UBE2K 6..151 CDD:467420 39/156 (25%)
UBA_II_E2_UBCD4 163..198 CDD:270574 46/175 (26%)

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