| Sequence 1: | NP_648185.1 | Gene: | MED24 / 38914 | FlyBaseID: | FBgn0035851 | Length: | 993 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006247477.1 | Gene: | Med24 / 619436 | RGDID: | 1564565 | Length: | 1006 | Species: | Rattus norvegicus |
| Alignment Length: | 1054 | Identity: | 287/1054 - (27%) |
|---|---|---|---|
| Similarity: | 505/1054 - (47%) | Gaps: | 114/1054 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MKENNKILQLIYVAWRERWTDSQWGINIKKVLPRGVSGDVYNLADCLMQQALIGSTANPLVLNYL 65
Fly 66 KHSLCAHLVSHAAVIRCIAKYDKLERVYCITALLEFLASIVDGVTCRIKSEEAV-LPSSVVHLVY 129
Fly 130 WLLQIFA----RTVQHYELYGEISAEQSYMLDQTCVVIDRLSQQQFLLSMLYVGCHEE------- 183
Fly 184 ------------------LEICGRIRDKYATIKGSLTNSNFTLNAPQVEQQLQQLAFIEAKHLEM 230
Fly 231 QPLNPPSTLEKISC-CVQPLLAVEVLLNPCKDTSYYVAELQMLQRLKKYSNTRLFYEIIRAGFLT 294
Fly 295 LSNVADTSPDTMWGAFMFFKMPHIIKQLHALQRIPGEQPPPADYIPELVEALELLIEDNLLLDFM 359
Fly 360 DTKCSCNMIEFLLNDWTKQQLVNDVHVKKFASQREA-ASQLLKKCDNGQQTPSNINFIKRAEVPL 423
Fly 424 SGVLKTL---CTNKVQDMVNVLCQVPVGNSFELILSVATVEGRLKTFVSRLIQCNENSKPVPGDL 485
Fly 486 GKLCVIRSTLFDVSFLMLTSIVQTYGSDVVLSERGDS----FFEKWVRECMVERNKLKNPRQILA 546
Fly 547 LCDDSIVDELLLSFSKPEASQLKPNNLSWQETCLNLPGVLHHVLIAWEQETLSSADVKSILDNIK 611
Fly 612 RRLFSFSVCATSFLCAYMYSVKETELLKPLNMIQQFLAPLTSEELSSQENAKERLALSYQIIRKM 676
Fly 677 QHDVHPAPSTKSRLIS--------------HSPLVEQFREVWRTVVDAGHLPVRAAQSLESLLLA 727
Fly 728 GGAAWLSTQLVEQLLACKYTR--DMSRTMDVVFAVMHLDIEKTTEALLQYVVAPLIL-RRQGEDI 789
Fly 790 NEPQSLVLARLCVYCIISCLESRKGNGTSALTAMKKRSRSHDDEELA------ANAAKVRKVIGD 848
Fly 849 GSDNSSDFTDTTTGAGLAALLGSTSTSELRTTPLTLREPLQTSVQHIFAVFLQFVSGDELSPKAV 913
Fly 914 FVYQFISLLVEC-GGERVAPVLRLLPNGLVQQLLKVLVTDDIKVGLISRLYDLRIQAGRLSAVSD 977
Fly 978 LCLWRNMQMARHSI 991 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| MED24 | NP_648185.1 | Med24_N | 3..979 | CDD:288171 | 280/1038 (27%) |
| Med24 | XP_006247477.1 | Med24_N | 1..1004 | CDD:288171 | 287/1054 (27%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166354463 | |
| Domainoid | 1 | 1.000 | 387 | 1.000 | Domainoid score | I770 |
| eggNOG | 1 | 0.900 | - | - | E1_2C72S | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H40795 | |
| Inparanoid | 1 | 1.050 | 386 | 1.000 | Inparanoid score | I1950 |
| OMA | 1 | 1.010 | - | - | QHG45577 | |
| OrthoDB | 1 | 1.010 | - | - | D323841at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0007958 | |
| OrthoInspector | 1 | 1.000 | - | - | oto98595 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_107547 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR12898 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X5901 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 15 | 14.810 | |||||