Protein Alignment Atg18a and AtATG18a

DIOPT Version :10

• Sequence 1: NP_001261565.1
• Gene: Atg18a / 38913
• FlyBaseID: FBgn0035850
• Length: 447
• Species: Drosophila melanogaster
• Sequence 2: NP_567132.4
• Gene: AtATG18a / 825452
• AraportID: AT3G62770
• Length: 425
• Species: Arabidopsis thaliana
• Alignment Length: 363
• Identity: 103/363 - (28%)
• Similarity: 177/363 - (48%)
• Gaps: 42/363 - (11%)

  Fly    17 VNFNQNITSLAVATSGGYSLYSLGSVDSTLDKIYHTKSDE---LFLIERLFESSLVAIVS----- 73
            ::|||:....||.|..|:.:.:.    ....:|:....|.   :.::|.||..:::|:|.
plant    81 LSFNQDHACFAVGTDRGFRILNC----DPFREIFRRDFDRGGGVAVVEMLFRCNILALVGGGPDP 141

  Fly    74 QRAPRKLKVCHFKKQSEICNYSYANTILAVKLNRERLIVCLEESLYIHNIQDMKVVHTIRDTPCN 138
            |..|.|:.:....:...|...|:.:.:.:|:|.|:|:||.||:.::::|..|:|::|.| :|..|
plant   142 QYPPNKVMIWDDHQGRCIGELSFRSDVRSVRLRRDRIIVVLEQKIFVYNFSDLKLMHQI-ETIAN 205

  Fly   139 PQGLCALSSSSEHCYLAYPGSVTAGEVQIFDAINLHAKTMIPAHDTPLAALAFSPSGTEIATASE 203
            |:||||:|.......|..|| :..|:|:|....:...| .:.|||:.:|..|.:..|..:||||.
plant   206 PKGLCAVSQGVGSMVLVCPG-LQKGQVRIEHYASKRTK-FVMAHDSRIACFALTQDGHLLATASS 268

  Fly   204 RGTVIRVFSSQDGSRLFELRRGLKRCVSIVSLSFSTCAEYLVSSSNTETVHIFRLDRSATETAEG 268
            :||::|:|::.||:...|:|||..| ..|.||:||:.|::|..||:..|||:|.|     :...|
plant   269 KGTLVRIFNTVDGTLRQEVRRGADR-AEIYSLAFSSNAQWLAVSSDKGTVHVFGL-----KVNSG 327

  Fly   269 HGSKQSSDDWMGYSFFRFLSKTVTSYLPTQVTDV--------FSQGRAFASVTLPEAGVRRMCAI 325
            ...|.||.          ::...|...|:....:        ||...:.|...|.| |.:.:.|.
plant   328 SQVKDSSR----------IAPDATPSSPSSSLSLFKGVLPRYFSSEWSVAQFRLVE-GTQYIAAF 381

  Fly   326 ATIQKQLRLLIASQDGYLYVYSIPTVEGAECQLIKRHD 363
            .  .::..::|...||..|......|.|.|...::.|:
plant   382 G--HQKNTVVILGMDGSFYRCQFDPVNGGEMSQLEYHN 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg18a	NP_001261565.1	WD40	23..269	CDD:475233	79/253 (31%)
		WD40 repeat	143..180	CDD:293791	10/36 (28%)
		WD40	<160..>271	CDD:441893	40/110 (36%)
		WD40 repeat	186..231	CDD:293791	18/44 (41%)
		WD40 repeat	232..258	CDD:293791	13/25 (52%)
AtATG18a	NP_567132.4	WD40	<134..319	CDD:441893	66/188 (35%)
		WD40 repeat	169..204	CDD:293791	14/35 (40%)
		WD40 repeat	209..246	CDD:293791	11/38 (29%)
		WD40 repeat	254..288	CDD:293791	13/33 (39%)