Sequence 1: | NP_001261565.1 | Gene: | Atg18a / 38913 | FlyBaseID: | FBgn0035850 | Length: | 447 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_666052.1 | Gene: | Wipi1 / 52639 | MGIID: | 1261864 | Length: | 446 | Species: | Mus musculus |
Alignment Length: | 438 | Identity: | 190/438 - (43%) |
---|---|---|---|
Similarity: | 274/438 - (62%) | Gaps: | 55/438 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 GRTDVDAGEVFVNFNQNITSLAVATSGGYSLYSLGSVDSTLDKIYHTKS-DELFLIERLFESSLV 69
Fly 70 AIVSQRAPRKLKVCHFKKQSEICNYSYANTILAVKLNRERLIVCLEESLYIHNIQDMKVVHTIRD 134
Fly 135 TPCNPQGLCALSSSSEHCYLAYPGSVTAGEVQIFDAINLHAKTMIPAHDTPLAALAFSPSGTEIA 199
Fly 200 TASERGTVIRVFSSQDGSRLFELRRGLKRCVSIVSLSFSTCAEYLVSSSNTETVHIFRLDRSATE 264
Fly 265 TAEGHGSKQSSDDWMGYSFFRFLSKTVTSYLPTQVTDVFSQGRAFASVTLPEAGVRRMCAIATIQ 329
Fly 330 KQLRLLIASQDGYLYVYSIPTVEGAECQLIKRHDL----RLEDHYAMDIKVDSPQTLGLNSGVSI 390
Fly 391 GGAAGVPPSSASAAGAGTGGSGGDGKSAVSVTGGVDKPSSSYASAVKG 438 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Atg18a | NP_001261565.1 | WD40 | <15..278 | CDD:225201 | 131/263 (50%) |
WD40 | 23..269 | CDD:295369 | 128/246 (52%) | ||
WD40 repeat | 143..180 | CDD:293791 | 15/36 (42%) | ||
WD40 repeat | 186..231 | CDD:293791 | 26/44 (59%) | ||
WD40 repeat | 232..258 | CDD:293791 | 16/25 (64%) | ||
Wipi1 | NP_666052.1 | WD40 | <88..262 | CDD:295369 | 99/173 (57%) |
WD40 | <100..265 | CDD:225201 | 89/164 (54%) | ||
Nuclear receptor interaction. /evidence=ECO:0000250 | 131..136 | 1/4 (25%) | |||
WD40 repeat | 144..184 | CDD:293791 | 18/39 (46%) | ||
WD 1 | 184..224 | 22/39 (56%) | |||
WD40 repeat | 189..226 | CDD:293791 | 21/36 (58%) | ||
WD 2 | 230..269 | 19/38 (50%) | |||
WD40 repeat | 236..265 | CDD:293791 | 15/28 (54%) | ||
WD40 repeat | 272..312 | CDD:293791 | 17/41 (41%) | ||
WD 3 | 312..351 | 17/38 (45%) | |||
WD40 repeat | 320..358 | CDD:293791 | 20/37 (54%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 386..406 | 7/13 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167831988 | |
Domainoid | 1 | 1.000 | 423 | 1.000 | Domainoid score | I624 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2110 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 423 | 1.000 | Inparanoid score | I1756 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54442 | |
OrthoDB | 1 | 1.010 | - | - | D1216824at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001466 | |
OrthoInspector | 1 | 1.000 | - | - | otm43483 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11227 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R106 |
SonicParanoid | 1 | 1.000 | - | - | X1186 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.900 |