Sequence 1: | NP_001261565.1 | Gene: | Atg18a / 38913 | FlyBaseID: | FBgn0035850 | Length: | 447 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001008184.1 | Gene: | wdr45b / 493546 | XenbaseID: | XB-GENE-1009828 | Length: | 344 | Species: | Xenopus tropicalis |
Alignment Length: | 362 | Identity: | 105/362 - (29%) |
---|---|---|---|
Similarity: | 168/362 - (46%) | Gaps: | 59/362 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 MSLLGRTDVDAGEVFVNFNQNITSLAVATSGGYSLYSLGSVDSTLDKIYHTKSDELFL------I 60
Fly 61 ERLFESSLVAIVS-----QRAPRKLKVCHFKKQSEICNYSYANTILAVKLNRERLIVCLEESL-- 118
Fly 119 --YIHNIQDMKVVHTIRDTPC-NPQGLCALSSSSEHCYLAYPGSVTAGEVQIFDAINLHAKTM-I 179
Fly 180 PAHDTPLAALAFSPSGTEIATASERGTVIRVFSSQDGSRLFELRRGLKRCVSIVSLSFSTCAEYL 244
Fly 245 VSSSNTETVHIFRLDRSATETAEGHGSKQSSDDWMGYSFFRFLSKTVTSYLPTQVTDVFSQGRAF 309
Fly 310 ASVTLPEAGVRRMCAIATIQKQLRLLIASQDGYLYVY 346 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Atg18a | NP_001261565.1 | WD40 | <15..278 | CDD:225201 | 85/279 (30%) |
WD40 | 23..269 | CDD:295369 | 79/262 (30%) | ||
WD40 repeat | 143..180 | CDD:293791 | 13/37 (35%) | ||
WD40 repeat | 186..231 | CDD:293791 | 21/44 (48%) | ||
WD40 repeat | 232..258 | CDD:293791 | 10/25 (40%) | ||
wdr45b | NP_001008184.1 | WD40 repeat | 58..98 | CDD:293791 | 8/39 (21%) |
WD40 | <80..258 | CDD:392136 | 66/184 (36%) | ||
WD40 repeat | 102..126 | CDD:293791 | 8/23 (35%) | ||
WD40 repeat | 145..183 | CDD:293791 | 14/38 (37%) | ||
WD 1 | 183..223 | 18/39 (46%) | |||
WD40 repeat | 188..225 | CDD:293791 | 17/36 (47%) | ||
WD 2 | 228..267 | 10/45 (22%) | |||
WD40 repeat | 234..267 | CDD:293791 | 9/39 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54442 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R106 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |