Sequence 1: | NP_001261565.1 | Gene: | Atg18a / 38913 | FlyBaseID: | FBgn0035850 | Length: | 447 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038942100.1 | Gene: | Wipi1 / 303630 | RGDID: | 1307754 | Length: | 467 | Species: | Rattus norvegicus |
Alignment Length: | 462 | Identity: | 190/462 - (41%) |
---|---|---|---|
Similarity: | 273/462 - (59%) | Gaps: | 82/462 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 GRTDVDAGEVFVNFNQNIT---------------------SLAVATSGGYSLYSLGSVDSTLDKI 49
Fly 50 YHTKS-DELFLIERLFESSLVAIVSQRAPRKLKVCHFKKQSEICNYSYANTILAVKLNRERLIVC 113
Fly 114 LEESLYIHNIQDMKVVHTIRDTPCNPQGLCALSSSSEHCYLAYPGSVTAGEVQIFDAINLHAKTM 178
Fly 179 IPAHDTPLAALAFSPSGTEIATASERGTVIRVFSSQDGSRLFELRRGLKRCVSIVSLSFSTCAEY 243
Fly 244 LVSSSNTETVHIFRLDRSATETAEGHGSKQSSDDWMGYSFFRFLSK---TVTSYLPTQVTDVFSQ 305
Fly 306 GRAFASVTLPEAGVRRMCAIATIQKQLRLLIASQDGYLYVYSIPTVEGAECQLIKRHDL----RL 366
Fly 367 EDHYAMDIKVDSPQTLGLNSGVSIGGAAGVPPSSASAAGAGTGGSGGDGKSAVSVTGGVDKPSSS 431
Fly 432 YASAVKG 438 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Atg18a | NP_001261565.1 | WD40 | <15..278 | CDD:225201 | 131/284 (46%) |
WD40 | 23..269 | CDD:295369 | 128/267 (48%) | ||
WD40 repeat | 143..180 | CDD:293791 | 15/36 (42%) | ||
WD40 repeat | 186..231 | CDD:293791 | 26/44 (59%) | ||
WD40 repeat | 232..258 | CDD:293791 | 16/25 (64%) | ||
Wipi1 | XP_038942100.1 | WD40 | <98..>365 | CDD:225201 | 137/277 (49%) |
WD40 repeat | 165..205 | CDD:293791 | 18/39 (46%) | ||
WD40 repeat | 210..247 | CDD:293791 | 21/36 (58%) | ||
WD40 repeat | 257..286 | CDD:293791 | 16/28 (57%) | ||
WD40 repeat | 293..333 | CDD:293791 | 17/44 (39%) | ||
WD40 repeat | 341..379 | CDD:293791 | 20/37 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166335662 | |
Domainoid | 1 | 1.000 | 424 | 1.000 | Domainoid score | I597 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2110 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 424 | 1.000 | Inparanoid score | I1708 |
OMA | 1 | 1.010 | - | - | QHG54442 | |
OrthoDB | 1 | 1.010 | - | - | D1216824at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001466 | |
OrthoInspector | 1 | 1.000 | - | - | otm45547 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11227 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1186 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.870 |