Sequence 1: | NP_001261565.1 | Gene: | Atg18a / 38913 | FlyBaseID: | FBgn0035850 | Length: | 447 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001007616.1 | Gene: | Wipi2 / 288498 | RGDID: | 1359154 | Length: | 445 | Species: | Rattus norvegicus |
Alignment Length: | 453 | Identity: | 241/453 - (53%) |
---|---|---|---|
Similarity: | 308/453 - (67%) | Gaps: | 41/453 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 MSLLGRT-DVDAGE-VFVNFNQNITSLAVATSGGYSLYSLGSVDSTLDKIYH-TKSDELFLIERL 63
Fly 64 FESSLVAIVSQRAPRKLKVCHFKKQSEICNYSYANTILAVKLNRERLIVCLEESLYIHNIQDMKV 128
Fly 129 VHTIRDTPCNPQGLCALSSSSEHCYLAYPGSVTAGEVQIFDAINLHAKTMIPAHDTPLAALAFSP 193
Fly 194 SGTEIATASERGTVIRVFSSQDGSRLFELRRGLKRCVSIVSLSFSTCAEYLVSSSNTETVHIFRL 258
Fly 259 DRSATETAEGHGSKQSSDDWMGYSFFRFLSKTVTSYLPTQVTDVFSQGRAFASVTLPEAGVRRMC 323
Fly 324 AIATIQKQLRLLIASQDGYLYVYSIPTVEGAECQLIKRHDLRLEDHYAMDIKVDS--------PQ 380
Fly 381 TLGLNSGVSIGGAAGVPPSSASAAGAG-----------TGGSGG----DGKSAVSVTGGVDKP 428 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Atg18a | NP_001261565.1 | WD40 | <15..278 | CDD:225201 | 173/263 (66%) |
WD40 | 23..269 | CDD:295369 | 168/246 (68%) | ||
WD40 repeat | 143..180 | CDD:293791 | 24/36 (67%) | ||
WD40 repeat | 186..231 | CDD:293791 | 32/44 (73%) | ||
WD40 repeat | 232..258 | CDD:293791 | 16/25 (64%) | ||
Wipi2 | NP_001007616.1 | WD40 | <21..272 | CDD:225201 | 170/257 (66%) |
WD40 repeat | 143..182 | CDD:293791 | 26/38 (68%) | ||
WD 1. /evidence=ECO:0000255 | 182..222 | 28/39 (72%) | |||
WD40 repeat | 188..228 | CDD:293791 | 28/39 (72%) | ||
FRRG motif. /evidence=ECO:0000250|UniProtKB:Q9Y4P8 | 223..226 | 1/2 (50%) | |||
WD 2. /evidence=ECO:0000255 | 228..267 | 22/38 (58%) | |||
WD40 repeat | 233..266 | CDD:293791 | 17/32 (53%) | ||
WD40 repeat | 274..309 | CDD:293791 | 21/36 (58%) | ||
WD 3. /evidence=ECO:0000255 | 311..349 | 17/37 (46%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 424 | 1.000 | Domainoid score | I597 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2110 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H90887 | |
Inparanoid | 1 | 1.050 | 424 | 1.000 | Inparanoid score | I1708 |
OMA | 1 | 1.010 | - | - | QHG54442 | |
OrthoDB | 1 | 1.010 | - | - | D1216824at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001466 | |
OrthoInspector | 1 | 1.000 | - | - | otm45547 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103112 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11227 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1186 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.880 |