DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERR and nr3c1

DIOPT Version :9

Sequence 1:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001018547.2 Gene:nr3c1 / 553740 ZFINID:ZDB-GENE-050522-503 Length:746 Species:Danio rerio


Alignment Length:511 Identity:145/511 - (28%)
Similarity:223/511 - (43%) Gaps:106/511 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GTNMSDG----------VSIL-HIKQEVDTPSASCFSP---SSKSTATQSGTNGLKSSPSVSPER 60
            |:|..:|          .||| :||.|.|:....| :|   ..::|.......||.|:|.     
Zfish   231 GSNTLNGTASSSLSTANTSILPNIKVEKDSIIQLC-TPGVIKQENTGASYCQGGLHSTPI----- 289

  Fly    61 QLCSSTTSL--------SCDLHNVSLSNDGD---SLKGSGTSGGNG---GGGGGGTSG------- 104
            .:|..|||.        |.....|.|..|..   ::....||.|:|   ..|.|..||       
Zfish   290 NICGVTTSSGQSFLFGNSSPTAVVGLQKDQKPDFNMYTPLTSSGDGWSRSQGFGNVSGMQQRASL 354

  Fly   105 ---------------GNATNASAGAGSGSVRDELRRLCLVCGDVASGFHYGVASCEACKAFFKRT 154
                           .:...:|||..:|:     .::||||.|.|||.||||.:|.:||.||||.
Zfish   355 CFSKNFSSSPYSRPEDSTATSSAGGKTGT-----HKICLVCSDEASGCHYGVLTCGSCKVFFKRA 414

  Fly   155 IQGNIEYTCPANNECEINKRRRKACQACRFQKCLLMGMLKEGVRLDRVRGGRQKYRRNPVSNSYQ 219
            ::|...|.|...|:|.|:|.|||.|.||||:|||:.||..|      .|..:.|.|:   :....
Zfish   415 VEGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLMAGMNLE------ARKSKSKARQ---AGKVI 470

  Fly   220 TMQLLYQSNTTSLCDVKILEVLNSYEPDALSVQTPPPQVHTTSITNDEASSSSGSIKLESSVVTP 284
            ..|.:.:.|...|.:.:.|            |..|.||:..|.::..:|             :.|
Zfish   471 QQQSIPERNLPPLPEARAL------------VPKPMPQLVPTMLSLLKA-------------IEP 510

  Fly   285 NGTCIFQNNNNNDPN---EILSVLSDIYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSWAEIL 346
            :  .::...::..|:   .:::.|:.:..::::|.:.|||.:|||.:|.|:|||.|||.||..|:
Zfish   511 D--TLYAGYDSTIPDTSVRLMTTLNRLGGRQVISAVKWAKALPGFRNLHLDDQMTLLQCSWLFIM 573

  Fly   347 TLQLTFRSLPF-NGK-LCFATDVWMDEHLAKECGYTEFYYHCVQIAQRMERISPRREEYYLLKAL 409
            :..|.:||... ||. ||||.|:.::|...|....::.....::|:....|:....|||..:|.|
Zfish   574 SFGLGWRSYQHCNGNMLCFAPDLVINEERMKLPYMSDQCEQMLKISNEFVRLQVSTEEYLCMKVL 638

  Fly   410 LLANC--DILLDDQSSLRAFRDTILNSLNDVVYLLRHSSAVSHQQ--QLLLLLPSL 461
            ||.|.  ...|..||.....|.:.:..|...:.....:|:.:.|:  ||..||.|:
Zfish   639 LLLNTVPKDGLKSQSVFDELRMSYIKELGKAIVKREENSSQNWQRFYQLTKLLDSM 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 43/95 (45%)
NR_LBD 237..493 CDD:299703 62/234 (26%)
nr3c1NP_001018547.2 GCR 18..369 CDD:280340 33/143 (23%)
NR_DBD_GR_PR 383..460 CDD:143546 41/87 (47%)
NR_LBD_GR_Like 500..744 CDD:132745 57/210 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578425
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48092
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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