DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERR and esrrgb

DIOPT Version :9

Sequence 1:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_005160912.1 Gene:esrrgb / 407691 ZFINID:ZDB-GENE-040616-4 Length:444 Species:Danio rerio


Alignment Length:457 Identity:184/457 - (40%)
Similarity:249/457 - (54%) Gaps:64/457 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LKSSPSVSPERQLCSSTTSLSCDLHNVSLSNDGDSLKGSGTSGGNGGGGGGGTSGGNA------- 107
            :|:.|| ||      |:.|.|...|:...|:|..|...||..|...|.....:...:|       
Zfish    35 IKTEPS-SP------SSLSDSLTQHSPGASSDAGSSYSSGPKGNLAGLDSPASYLRSAPCRLLEE 92

  Fly   108 --TNASAGAGSGSVRDELRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECE 170
              .....|..||.     :|||||||||||||||||||||||||||||||||||||:|..:.:||
Zfish    93 AQAKGEYGLSSGP-----KRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYSCSVSRDCE 152

  Fly   171 INKRRRKACQACRFQKCLLMGMLKEGVRLDRVRGGRQKYRRNPVSNS--YQTMQLLYQS--NTTS 231
            |.|||||:||||||.|||.:|||:|||||||||||||||:|...|:|  |.::.|.::.  :.::
Zfish   153 ITKRRRKSCQACRFTKCLSVGMLREGVRLDRVRGGRQKYKRRIDSDSSVYLSVPLPHRKPVSCSA 217

  Fly   232 LCDVKILEVLNSYEPDALSVQTPPPQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNNNNN 296
            ..:.|::.:|...||:.:... |.|.:..:.|                                 
Zfish   218 HAENKVVTLLLGAEPEKVCAM-PDPALPDSDI--------------------------------- 248

  Fly   297 DPNEILSVLSDIYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSWAEILTLQLTFRSLPFNGKL 361
               :.|:.|.|:.|:|||..|.|||.||||..|.|:|||.|||.:|.|||.|::.|||||.:.:|
Zfish   249 ---KALTTLCDLADRELVLNISWAKHIPGFSSLSLSDQMSLLQSAWMEILVLRVAFRSLPCDDRL 310

  Fly   362 CFATDVWMDEHLAKECGYTEFYYHCVQIAQRMERISPRREEYYLLKALLLANCDIL-LDDQSSLR 425
            .||.|..||...||..|..|.:...:|:.:|...:|..|||:..|||:.|||.|.: ::|..:::
Zfish   311 LFADDYIMDAEQAKCAGLLELHTAILQLVRRYRCMSLEREEFVTLKAIALANSDSMHIEDVEAVQ 375

  Fly   426 AFRDTILNSLNDVVYLLRHSSAVSHQQQLLLLLPSLRQADDILRRFWRGIARDEVITMKKLFLEM 490
            ..:|.:..:|.| ...:.||.......:|::.||.|||......|.:..|.:|..:.|.|||||:
Zfish   376 GLQDALHEALLD-YECVHHSEDPRRAGKLIMTLPLLRQTSAKAVRHFCSIKQDGRVPMHKLFLEL 439

  Fly   491 LE 492
            ||
Zfish   440 LE 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 75/95 (79%)
NR_LBD 237..493 CDD:299703 85/257 (33%)
esrrgbXP_005160912.1 NR_DBD_ERR 105..199 CDD:143544 75/98 (77%)
NR_LBD_ERR 223..442 CDD:132744 85/257 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578428
Domainoid 1 1.000 121 1.000 Domainoid score I5637
eggNOG 1 0.900 - - E33208_3BAW9
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 290 1.000 Inparanoid score I2777
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D297679at33208
OrthoFinder 1 1.000 - - FOG0001624
OrthoInspector 1 1.000 - - otm25657
orthoMCL 1 0.900 - - OOG6_106347
Panther 1 1.100 - - O PTHR48092
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5621
SonicParanoid 1 1.000 - - X1027
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.830

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