DRSC/TRiP Functional Genomics Resources

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Protein Alignment ERR and esrra

DIOPT Version :9

Sequence 1:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_005161401.1 Gene:esrra / 405891 ZFINID:ZDB-GENE-990415-68 Length:441 Species:Danio rerio


Alignment Length:451 Identity:187/451 - (41%)
Similarity:238/451 - (52%) Gaps:88/451 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 GNGGGGGGGTSGGNATNASAGAGSGSVRDE-------------LR-------------------- 124
            |.||||||.||.|.|::.|:.:|.|..|.|             ||                    
Zfish    26 GGGGGGGGRTSPGGASSDSSQSGGGGSRGEGAGRYSPPLYTPALRCHFKEEGADGAEEGSTGSGG 90

  Fly   125 ------------RLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEINKRRRK 177
                        ||||||||||||:||||||||||||||||||||||||:|||:|||||.|||||
Zfish    91 GRCKYALSTLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGNIEYSCPASNECEITKRRRK 155

  Fly   178 ACQACRFQKCLLMGMLKEGVRLDRVRGGRQKYRRNP-VSN-SYQTMQLLYQSNTTSLCDVKILEV 240
            |||||||.|||.:|||||||||||||||||||:|.| |.| :||:..:..:..........|:..
Zfish   156 ACQACRFTKCLKVGMLKEGVRLDRVRGGRQKYKRRPEVENATYQSAPIPLRKEGEKGSSSIIVSH 220

  Fly   241 LNSYEPDALSVQTPPPQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNNNNNDPNEILSVL 305
            |...||:.|.....|.|..|...|                                     |:.|
Zfish   221 LLVAEPEKLFAMPDPLQPDTAQRT-------------------------------------LTTL 248

  Fly   306 SDIYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSWAEILTLQLTFRSLPFNGKLCFATDVWMD 370
            .|:.|:|||.:|||||.||||:.|.|.|||.:||..|.|:|.|.:.:|||....::.||.|..:|
Zfish   249 CDLADRELVVIIGWAKHIPGFLSLSLADQMSVLQSVWLEVLVLGVAYRSLGCEDEVVFAEDFVLD 313

  Fly   371 EHLAKECGYTEFYYHCVQIAQRMERISPRREEYYLLKALLLANCD-ILLDDQSSLRAFRDTILNS 434
            |.:::..|.||......|:|:|...:...|||:.:|||:.|.|.| :.::|..:::..||.:..:
Zfish   314 EEMSRVAGLTELNAAISQLARRFRALQLDREEFVMLKAIALTNSDSVYIEDMEAVQKLRDLLHQA 378

  Fly   435 LNDVVYLLRHSSAVSHQQQLLLLLPSLRQ-ADDILRRFWRGIARDEVITMKKLFLEMLEPL 494
            |.: :.:.|.........:|||.||.||| |...|..|: .|.....:.|.||||||||.:
Zfish   379 LLE-LEVQRRPDDPQRAGRLLLTLPLLRQTAGRALTTFY-SIKTRGGVPMHKLFLEMLEAM 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 85/142 (60%)
NR_LBD 237..493 CDD:299703 84/257 (33%)
esrraXP_005161401.1 NR_DBD_ERR 99..195 CDD:143544 81/95 (85%)
NR_LBD_ERR 217..436 CDD:132744 84/257 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578419
Domainoid 1 1.000 139 1.000 Domainoid score I4742
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 290 1.000 Inparanoid score I2777
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D297679at33208
OrthoFinder 1 1.000 - - FOG0001624
OrthoInspector 1 1.000 - - otm25657
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48092
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1027
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1010.000

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