DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERR and esrrga

DIOPT Version :9

Sequence 1:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_021322804.1 Gene:esrrga / 405890 ZFINID:ZDB-GENE-030821-2 Length:512 Species:Danio rerio


Alignment Length:496 Identity:194/496 - (39%)
Similarity:255/496 - (51%) Gaps:83/496 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 HIKQEVDTPSASCFSPSSKSTATQSGTNGLKSSPSVSPERQLCSSTTSLSCDLHNVSLSNDGDSL 85
            ||  |...||.....|||.::.|.|..:   .||..|.:   .|.:.|.:.:.|...|  |..:|
Zfish    73 HI--ESSCPSYIKTEPSSPASLTDSVNH---HSPGGSSD---ASGSYSSTMNGHQNGL--DSPTL 127

  Fly    86 KGSGTSGGNGGGGGGGTSGGNATNASAGAGSGS-VRDEL------RRLCLVCGDVASGFHYGVAS 143
            .|.     .|..|..||......:.|:.....| ::.|.      :||||||||:|||:||||||
Zfish   128 YGP-----TGALGPSGTGAKRYEDCSSTITEDSQIKCEYMLNSMPKRLCLVCGDIASGYHYGVAS 187

  Fly   144 CEACKAFFKRTIQ----GNIEYTCPANNECEINKRRRKACQACRFQKCLLMGMLKEGVRLDRVRG 204
            |||||||||||||    |||||:|||.|||||.|||||:||||||.|||.:||::||||||||||
Zfish   188 CEACKAFFKRTIQGLATGNIEYSCPATNECEITKRRRKSCQACRFMKCLTVGMMREGVRLDRVRG 252

  Fly   205 GRQKY-RRNPVSNS-YQTMQLLYQSNTT----SLCDVKILEVLNSYEPDALSVQTPPPQVHTTSI 263
            ||||| ||....|| |...||.......    .|.|.||:..|...||:.:... |.|.|..:.|
Zfish   253 GRQKYKRRIDAENSPYLNPQLALPPKKPFPFGCLADNKIVSHLLVAEPEKIYAM-PDPTVPDSDI 316

  Fly   264 TNDEASSSSGSIKLESSVVTPNGTCIFQNNNNNDPNEILSVLSDIYDKELVSVIGWAKQIPGFID 328
                                                :.|:.|.|:.|:|||..|||||.||||..
Zfish   317 ------------------------------------KALTTLCDLADRELVVNIGWAKHIPGFST 345

  Fly   329 LPLNDQMKLLQVSWAEILTLQLTFRSLPFNGKLCFATDVWMDEHLAKECGYTEFYYHCVQIAQRM 393
            |.|.|||.|||.:|.|||.|::.:|||.|..||.:|.|..|||..:|..|..:.....:|:.::.
Zfish   346 LSLADQMSLLQSAWMEILILRVVYRSLSFEDKLVYAEDYIMDEDQSKLAGLLDLNNAILQLVKKY 410

  Fly   394 ERISPRREEYYLLKALLLANCDIL-LDDQSSLRAFRDTILNSLNDVVYLLRHSSAVSHQQ----- 452
            :.:...:||:..|||:.|||.|.: ::|..:::..:|.:..:|.|.       .|..|.:     
Zfish   411 KSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDY-------EAGQHVEDPRRA 468

  Fly   453 -QLLLLLPSLRQADDILRRFWRGIARDEVITMKKLFLEMLE 492
             :||:.||.|||......:.:..|.:|..:.|.|||||:||
Zfish   469 GKLLMTLPLLRQTSTKAVQHFYSIKQDGKVPMHKLFLELLE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 77/106 (73%)
NR_LBD 237..493 CDD:299703 83/263 (32%)
esrrgaXP_021322804.1 NR_DBD_ERR 165..265 CDD:143544 76/99 (77%)
NR_LBD_ERR 291..510 CDD:132744 83/263 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578427
Domainoid 1 1.000 139 1.000 Domainoid score I4742
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55581
Inparanoid 1 1.050 290 1.000 Inparanoid score I2777
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D297679at33208
OrthoFinder 1 1.000 - - FOG0001624
OrthoInspector 1 1.000 - - otm25657
orthoMCL 1 0.900 - - OOG6_106347
Panther 1 1.100 - - O PTHR48092
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5621
SonicParanoid 1 1.000 - - X1027
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.930

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