Protein Alignment ERR and nhr-140

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_504768.1
• Gene: nhr-140 / 3565647
• WormBaseID: WBGene00016366
• Length: 346
• Species: Caenorhabditis elegans
• Alignment Length: 384
• Identity: 79/384 - (20%)
• Similarity: 149/384 - (38%)
• Gaps: 91/384 - (23%)

  Fly   127 CLVCGDVASGFHYGVASCEACKAFFKRTIQG---NIEYTCPANNECEINKRRRKACQACRFQKCL 188
            |.|||..:|..|:|..||.||.|||:|.:..   .||.||....:..      ..|:.||..||:
 Worm     3 CGVCGAKSSESHFGGLSCRACAAFFRRYVNSKKPQIECTCSQKFDSS------GPCRYCRMLKCV 61

  Fly   189 LMGMLKEGVRLDRVRGGRQKYRRNPVSN-SYQTMQLLYQSNTTSLCDVKILEVLNSYEPDALSVQ 252
            .:||.|..|:..|.:.....:....::| |..:..::.:|.:...|.||....|:....|
 Worm    62 EVGMAKCKVQATRQKNKEYVFLPCAITNISLLSCNIIPRSCSKLTCTVKNWPDLDKKRRD----- 121

  Fly   253 TPPPQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQ-----NNNNNDPNEILSVLSDIYDKE 312
                 ::..|:.|...:..|..::.::::.......||.     |:::.|     ::|.:.:.:.
 Worm   122 -----LYGGSMYNLNFTQFSNRVRQDTTIFWDLAESIFSEIGLLNSDDKD-----ALLCNFFPRW 176

  Fly   313 LV--SVIGWAKQIPGFIDLPLNDQMKLLQVSWAEILTLQLTFRSLPFNGKLCFATDVWMDEHLAK 375
            ::  :.|.:.|.        .....|:::....:.:.|.....|:|...:|       .|:.:.:
 Worm   177 MLMEAAIEYCKN--------YEHHWKMIETDGLDNMLLVFYGSSMPKEKRL-------DDDKIIQ 226

  Fly   376 --ECGYTEFYYHCVQIAQRMERISPRREEYYLLKALLLANCDILLDDQSSLRAFRDTILNSLNDV 438
              ...:|.||   ::||:.:.:....:.|:..|..|:|               |.|..||...:.
 Worm   227 IFRPYWTRFY---IEIAEPIHQEKCDKVEFMALFLLIL---------------FDDAYLNISEEA 273

  Fly   439 VYLLRHSSAVSHQQQLLLLLPSLR--QAD---------DILRR---FWRGIAR--DEVI 481
            ..|.|:...|        :|..|:  |.|         |::.:   |.||..|  :|::
 Worm   274 AKLCRNLQKV--------ILRELKGYQMDNNCSEMRFMDVISKLSLFERGEKRLQEEIV 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	30/93 (32%)
		NR_LBD	237..493	CDD:299703	44/270 (16%)
nhr-140	NP_504768.1	ZnF_C4	3..65	CDD:197701	24/67 (36%)
		HOLI	154..314	CDD:214658	34/205 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910