DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERR and Esrrb

DIOPT Version :9

Sequence 1:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_038967983.1 Gene:Esrrb / 299210 RGDID:1359557 Length:510 Species:Rattus norvegicus


Alignment Length:517 Identity:205/517 - (39%)
Similarity:270/517 - (52%) Gaps:94/517 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DTPSASC----FSPSSKSTATQSGTNGLKSSP--SVSP----------ERQLCSSTTSLSCDLHN 75
            :|.:..|    ..|.::|:||::....|.|.|  ..||          :|.|.||..|. .....
  Rat    34 ETQTGDCQLVSEEPGNESSATETPEGNLSSQPRSPASPTMLLNRMSSEDRHLGSSCGSF-IKTEP 97

  Fly    76 VSLSNDGDSLKGSGTSGGNGGGGGGGTSGGNATN--------ASAGAG------------SGSVR 120
            .|.|:..|:|.....||.:...||.|.:.|...|        |.||.|            ||.:.
  Rat    98 SSPSSGIDALSHHSPSGSSDASGGFGMALGTHANGLDSPPMFAGAGLGGNPCRKSYEDCTSGIME 162

  Fly   121 DEL-----------RRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEINKR 174
            |..           :||||||||:|||:||||||||||||||||||||||||:|||.|||||.||
  Rat   163 DSAIKCEYMLNAIPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKR 227

  Fly   175 RRKACQACRFQKCLLMGMLKEGVRLDRVRGGRQKYRR--NPVSNSYQTMQLLYQSNTTSLCDVKI 237
            |||:||||||.|||.:|||||||||||||||||||:|  :..::.|.::|:   |........||
  Rat   228 RRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSENSPYLSLQI---SPPAKKPLTKI 289

  Fly   238 LEVLNSYEPDALSVQTPPPQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNNNNNDPNEIL 302
            :..|...|||.|... ||..|            ..|.||                        .|
  Rat   290 VSYLLVAEPDKLYAM-PPDDV------------PEGDIK------------------------AL 317

  Fly   303 SVLSDIYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSWAEILTLQLTFRSLPFNGKLCFATDV 367
            :.|.|:.|:|||.:|.|||.||||.:|.|.|||.|||.:|.|||.|.:.:||||::.||.:|.|.
  Rat   318 TTLCDLADRELVFLISWAKHIPGFSNLTLGDQMSLLQSAWMEILILGIVYRSLPYDDKLAYAEDY 382

  Fly   368 WMDEHLAKECGYTEFYYHCVQIAQRMERISPRREEYYLLKALLLANCD-ILLDDQSSLRAFRDTI 431
            .|||..::..|..|.|...:|:.:|.:::...:||:.:||||.|||.| :.:::..:::..:|.:
  Rat   383 IMDEEHSRLVGLLELYRAILQLVRRYKKLKVEKEEFVMLKALALANSDSMYIENLEAVQKLQDLL 447

  Fly   432 LNSLNDVVYLLRHSSAVSHQQQLLLLLPSLRQ-ADDILRRFWRGIARDEVITMKKLFLEMLE 492
            ..:|.|.....||... ....:|||.||.||| |...::.|: .:.....:.|.||||||||
  Rat   448 HEALQDYELSQRHEEP-RRAGKLLLTLPLLRQTAAKAVQHFY-SVKLQGKVPMHKLFLEMLE 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 78/108 (72%)
NR_LBD 237..493 CDD:299703 90/258 (35%)
EsrrbXP_038967983.1 NR_DBD_ERR 175..270 CDD:143544 77/94 (82%)
NR_LBD_ERR 289..508 CDD:132744 90/258 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338819
Domainoid 1 1.000 138 1.000 Domainoid score I4712
eggNOG 1 0.900 - - E33208_3BAW9
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 292 1.000 Inparanoid score I2684
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D297679at33208
OrthoFinder 1 1.000 - - FOG0001624
OrthoInspector 1 1.000 - - otm45415
orthoMCL 1 0.900 - - OOG6_106347
Panther 1 1.100 - - O PTHR48092
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1027
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

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