DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERR and Esr1

DIOPT Version :9

Sequence 1:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_017444286.2 Gene:Esr1 / 24890 RGDID:2581 Length:665 Species:Rattus norvegicus


Alignment Length:525 Identity:150/525 - (28%)
Similarity:247/525 - (47%) Gaps:85/525 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SASCFSPSSKSTATQSGTNGLKSSP---SVSPE-RQLCSSTTSLSCDLH------NVSLSNDGD- 83
            |:..:.|.|::.|  .|.|.|.:.|   ||||. ..|......||..||      ...|.|:.. 
  Rat   114 SSITYGPGSEAAA--FGANSLGAFPQLNSVSPSPLMLLHPPPQLSPFLHPHGHQVPYYLENEPSA 176

  Fly    84 -SLKGSGTSGGNGGGGGGGTSGGNATNASAGAGSGSVRDELR--RLCLVCGDVASGFHYGVASCE 145
             :::.:|...............|....:|:......:.:..:  |.|.||.|.|||:||||.|||
  Rat   177 YAVRDTGPPAFYRSNSDNRRQNGRERLSSSSEKGNMIMESAKETRYCAVCNDYASGYHYGVWSCE 241

  Fly   146 ACKAFFKRTIQGNIEYTCPANNECEINKRRRKACQACRFQKCLLMGMLKEGVRLDRVRGGRQ-KY 209
            .|||||||:|||:.:|.|||.|:|.|:|.|||:|||||.:||..:||:|.|:|.|| ||||. |:
  Rat   242 GCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKH 305

  Fly   210 RRNPVSNSYQTMQLLYQSNTTSLCDVKILEVLNSYEPDALSVQTPPPQVHTTSITNDEASSSSGS 274
            :|       |...|..::...:..|::...:.    |..|.::.........|:|.|:       
  Rat   306 KR-------QRDDLEGRNEMGTSGDMRAANLW----PSPLVIKHTKKNSPALSLTADQ------- 352

  Fly   275 IKLESSVVTPNGTCIFQNNNNNDP---NEILSVLSDIYDKELVSVIGWAKQIPGFIDLPLNDQMK 336
              :.|:::......|:...:.:.|   ..::.:|:::.|:|||.:|.|||::|||.||.|:||:.
  Rat   353 --MVSALLDAEPPLIYSEYDPSRPFSEASMMGLLTNLADRELVHMINWAKRVPGFGDLNLHDQVH 415

  Fly   337 LLQVSWAEILTLQLTFRSLPFNGKLCFATDVWMDEHLAK-------------------------- 375
            ||:.:|.|||.:.|.:||:...|||.||.::.:|..:..                          
  Rat   416 LLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRDIISGLQILLVSLDFSERTFNPLTKCPFSS 480

  Fly   376 -----EC--GYTEFYYHCVQIAQRMERISPRREEYYLLKALLLANCDILLDDQSSLRAFRD---- 429
                 :|  |..|.:...:..:.|...::.:.||:..||:::|.|..:.....|:|::..:    
  Rat   481 LRNQGKCVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHI 545

  Fly   430 -TILNSLND-VVYLLRHSSAVSHQQ-----QLLLLLPSLRQADDILRRFWRGIARDEVITMKKLF 487
             .:|:.:.| :::|:..:.....||     ||||:|..:|...:........:....|:.:..|.
  Rat   546 HRVLDKITDTLIHLMAKAGLTLQQQHRRLAQLLLILSHIRHMSNKGMEHLYNMKCKNVVPLYDLL 610

  Fly   488 LEMLE 492
            ||||:
  Rat   611 LEMLD 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 56/98 (57%)
NR_LBD 237..493 CDD:299703 69/303 (23%)
Esr1XP_017444286.2 Oest_recep 75..219 CDD:396642 22/106 (21%)
NR_DBD_ER 218..299 CDD:143545 50/81 (62%)
NR_LBD_ER 348..617 CDD:132747 66/277 (24%)
ESR1_C 626..665 CDD:403830
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338811
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48092
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.940

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