Protein Alignment ERR and nhr-238

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_503461.1
• Gene: nhr-238 / 189971
• WormBaseID: WBGene00021611
• Length: 333
• Species: Caenorhabditis elegans
• Alignment Length: 360
• Identity: 92/360 - (25%)
• Similarity: 145/360 - (40%)
• Gaps: 94/360 - (26%)

  Fly   127 CLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEI-NKRRRKACQACRFQKCLLM 190
            |.||...|..||:|...||||.|||:|.:..:...|...:..|:: ||..||.|.:||:||||.:
 Worm     8 CGVCEHSADVFHFGAICCEACAAFFRRLVSRSKTPTAICSGNCDLRNKIIRKLCSSCRYQKCLQI 72

  Fly   191 GMLKEGVRLDRVRGGRQKYRRNPVSNSYQTMQLLYQSNTTSLCDVKILEVLNSYEPDALSVQTPP 255
            || ||.:    |:..:||                     ||..:..|||.||....:.|.::
 Worm    73 GM-KESL----VKSKKQK---------------------TSSSEKTILEELNEAYQNLLDLR--- 108

  Fly   256 PQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNNNNNDPNEILSVLSDIYDKELVSVIGWA 320
                ..:..|.||..:                 .|:     :.:::.||...:..:.||..  :.
 Worm   109 ----KETFRNQEAKLT-----------------YFE-----EMDDVCSVDLSLVVETLVRT--FY 145

  Fly   321 KQIPGFIDLPLNDQMKLLQVSW-AEILTLQLTFRSLPFNGKLCF---------------ATDVWM 369
            |..|     ..:||.:||..:: .|.:.:.::|||:..|..:..               :|.:..
 Worm   146 KMAP-----MEDDQQRLLVKNFLVEFMLMDMSFRSIDSNVIILANGNYVDVKNLDEHFQSTKIVS 205

  Fly   370 DEHLAKECG-YTEFYYHCV--QIAQRMERISPRREEYYLLKALLLANCDILLDDQSSLRA----- 426
            ||..|.|.. |.:.|:...  |:..|.:.:...|.|:.||.|||.  .|..|::||...:
 Worm   206 DESKAAEAKLYLKSYWEMAESQLVGRFQELRVDRNEHLLLCALLY--WDFGLENQSEESSEICLK 268

  Fly   427 FRDTILNSLNDVVYLLRHSSA---VSHQQQLLLLL 458
            .|..|...|::  |..:.||.   .|....|:|:|
 Worm   269 LRSRIFKELSN--YERKQSSTEKQFSRTGDLILIL 301

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	35/90 (39%)
		NR_LBD	237..493	CDD:299703	55/249 (22%)
nhr-238	NP_503461.1	ZnF_C4	8..77	CDD:197701	31/69 (45%)
		NR_LBD	123..307	CDD:132726	45/195 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910