Protein Alignment ERR and nhr-230

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_507681.2
• Gene: nhr-230 / 189442
• WormBaseID: WBGene00012446
• Length: 414
• Species: Caenorhabditis elegans
• Alignment Length: 267
• Identity: 60/267 - (22%)
• Similarity: 98/267 - (36%)
• Gaps: 72/267 - (26%)

  Fly   110 ASAGAGSGSVRDELRRLCLVCGDVASGFHYGVASCEACKAFFKR------TIQGNIEYTCPANNE 168
            ||....|.....||  :|.||...|.|.|:|..:|.||.|||:|      |::     .|.....
 Worm     5 ASTSILSQEESSEL--ICAVCSQPARGRHFGAVACRACAAFFRRADAAKTTVK-----PCKKGGN 62

  Fly   169 CE--INKRRRKACQACRFQKCLLMGMLKEGVRLDRVRGGRQKYRRNPVS----NSYQTMQ----- 222
            |:  :|......|:.||.|||..:||.....:.|          |:|:|    |...:|:
 Worm    63 CQNLLNNNGWFDCKFCRLQKCYEIGMNSANFQFD----------RDPISTKLTNVPNSMEGFLGR 117

  Fly   223 ---LLYQSNTTSLCDVKILE----------VLNSYEPDAL----SVQTPPPQVHTTSITNDEASS 270
               :::.......|:..:::          :|.......|    ::|.....:....|.:|  ||
 Worm   118 PHCVIFVDPEVVRCEKDLIDCTDLLRKAGRILKEGSESPLYTKSNLQKLAEALQKIDICHD--SS 180

  Fly   271 SSGSIKLESSVVTPNGTCIFQNNNNNDPNEILSVLSDIYDKELVSVIGWAKQIPGFIDLPLNDQM 335
            .|..:||    ||..|           ..|:.|    .::::.:....|......|.||....::
 Worm   181 PSQPVKL----VTKYG-----------KEEVFS----FFEQDFLKATRWFTYFDEFQDLDQEQKL 226

  Fly   336 KLLQVSW 342
            :|:|..|
 Worm   227 ELIQAIW 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	32/107 (30%)
		NR_LBD	237..493	CDD:299703	22/120 (18%)
nhr-230	NP_507681.2	NR_DBD_like	20..98	CDD:295381	27/92 (29%)
		Hormone_recep	181..391	CDD:278530	15/72 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910