DRSC/TRiP Functional Genomics Resources

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Protein Alignment ERR and nhr-205

DIOPT Version :9

Sequence 1:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_505588.1 Gene:nhr-205 / 187567 WormBaseID:WBGene00011002 Length:387 Species:Caenorhabditis elegans


Alignment Length:400 Identity:88/400 - (22%)
Similarity:149/400 - (37%) Gaps:109/400 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 CLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEINKRRRKACQACRFQKCLLMG 191
            |.:||||..|.|:|:.:|.||.|||:||:....::.|.....|:||...|..|::||..|||.:|
 Worm    23 CAICGDVGDGHHFGLDACRACAAFFRRTVALGKKFECRQQGACKINTIIRSICKSCRLNKCLNLG 87

  Fly   192 MLKEGVRLDRVRGGRQKYRRNPVSNSYQTMQLLYQSNTTSLCDVKI--LEVLNSYEPDALSVQTP 254
            |.:..|:..|.:..:::             :|:..|...|..|:::  :||       .::|:..
 Worm    88 MKRS
CVQPRRDKPQKEE-------------KLILPSMNVSPADIEVSCIEV-------PIAVEAM 132

  Fly   255 PPQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNNNNNDP--NEILSVLSDIYDKELVS-V 316
            |  :....:.|.|...:|.:|     :....|..||:.......  .|.|.:||:  :..||: .
 Worm   133 P--ILQKMLANYEKLKNSRNI-----IHRREGDNIFEKRTPRSLKFRETLEILSN--EMSLVADW 188

  Fly   317 IGWA------------------------------------------------KQIPGFIDLPLND 333
            |||.                                                .||....:...::
 Worm   189 IGWCFNEFEFLPTDQKSILFSNFSVNFIVLERAFLTSKHNNLNQWVLQSGDYIQIDNLEEFFTDE 253

  Fly   334 QMKLLQVSWAEILTLQL----TFRSLPFNGK------LCFATDVWMDEHLAKECGYTEFYYHCVQ 388
            |:|:.....|::....|    .|..|..:.|      |.|...::.|..:.   |.||   .|.:
 Worm   254 QLKIDGTKLAKLFKPSLEQNDNFHKLLKSEKIEMYDFLVFVVLLFWDHGIV---GQTE---ECRE 312

  Fly   389 IAQRMERISPRREEYYLLKALLLAN--CDILLDDQSSLRAFRDTILNSLNDVVYLLRHSSAVSHQ 451
            |:::|:........|||.......|  |.:.:         ..:||..|..:|..||...:::|.
 Worm   313 ISKKMKSNVTNEYIYYLKYIQKNENPVCQLTM---------LVSILTCLQRIVCRLREDMSLAHV 368

  Fly   452 QQLLLLLPSL 461
            .....|.|:|
 Worm   369 FDGYTLPPNL 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 31/89 (35%)
NR_LBD 237..493 CDD:299703 52/289 (18%)
nhr-205NP_505588.1 ZnF_C4 22..91 CDD:197701 29/67 (43%)
HOLI 178..355 CDD:214658 33/193 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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