DRSC/TRiP Functional Genomics Resources

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Protein Alignment ERR and nhr-202

DIOPT Version :9

Sequence 1:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_503210.1 Gene:nhr-202 / 187409 WormBaseID:WBGene00019742 Length:414 Species:Caenorhabditis elegans


Alignment Length:425 Identity:86/425 - (20%)
Similarity:165/425 - (38%) Gaps:75/425 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 TNASAGAGSGSVRDELRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEIN 172
            |..|:|:....:.....:.|.||.....|.|:|..:|.||..||:|....|....|..||.|:..
 Worm     3 TPCSSGSSPPDLTISTTKKCPVCYKPPHGIHFGAYTCRACAVFFRRFGASNNLKPCKKNNVCDFY 67

  Fly   173 KRRRKACQACRFQKCLLMGMLKEGVRLDRVRGGRQKYRRNPVSNSY-----QTMQLLY------- 225
            |....:|:.||.:||..:||..|..:.:     |..|:|:.:..|.     .|::...       
 Worm    68 KNGYVSCKKCRLKKCFEIGMKIENFQFE-----RDPYKRSSICISLAGRIPPTLETFLARPSFII 127

  Fly   226 -------QSNTTSLCDVKILEVLNSYEPDALSVQTPPPQVHTTSITNDEASSSSGSIKLESSVVT 283
                   ..|.....|||.| :..||......::||   :.|::|..        .:.|....|.
 Worm   128 LTAPPKDAQNPKVYIDVKFL-IDKSYGELLKGIETP---IQTSNILK--------KLALGLQQVR 180

  Fly   284 PNGTCIFQNNNNNDPNEILSVLSDIYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSWA----- 343
            .:...:.:.......:|:.:    :::.:::.|..|......|.......|:::::..|.     
 Worm   181 GSQRKVTKRLEKFGKDEMFA----MWENDMLKVAKWFTYFEDFQQFSSEFQIEIIKKVWIVWNGL 241

  Fly   344 ----------------EILTLQLTFRSLPFNGKLCFATDVWMDEHLAKECGYTEFYYH-CVQIAQ 391
                            :||.:......|...||.......|...:.|::..:.:..:: ..::.:
 Worm   242 EKLATTAKMRKRMNCDDILMVLQMENDLVACGKSVEFDLSWCSNYKAEQFAFIDSNWNKHEELLE 306

  Fly   392 RMERISPRREEY-YLLKALLLANCDILLDDQ--SSLRAFRDTILNSLNDVVYLLRHSSAVSHQQQ 453
            .|.:::|..||. |:|..|.........|.|  .::..|:|:|.|.|:|  |.|.|.|..::..:
 Worm   307 LMVQLNPTDEELCYMLCHLCFQQISKQCDGQILEAVEQFQDSISNHLHD--YYLNHLSRPNYSGR 369

  Fly   454 LLLLLPSLRQADDILRRFWRGIARDEV-ITMKKLF 487
            :..|:    :.:.|.::|   |.:|:: :.:.|:|
 Worm   370 IAALM----KLNSIAQQF---IYQDQINVEILKVF 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 29/95 (31%)
NR_LBD 237..493 CDD:299703 48/277 (17%)
nhr-202NP_503210.1 ZnF_C4 21..90 CDD:197701 25/68 (37%)
Hormone_recep 183..397 CDD:365875 38/226 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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