DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERR and Pgr

DIOPT Version :10

Sequence 1:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_032855.2 Gene:Pgr / 18667 MGIID:97567 Length:926 Species:Mus musculus


Alignment Length:593 Identity:151/593 - (25%)
Similarity:241/593 - (40%) Gaps:174/593 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LHIKQEVDTPSASCFSP-------SSKST--------------ATQSGTNGLKSSPSVSPERQLC 63
            |.||:|.:...|:..||       :|.||              :::.|...:...||.:......
Mouse   385 LKIKEEEEGADAAVRSPRPYLSAGASSSTFPDFPLAPAPQRAPSSRPGEAAVAGGPSSAAVSPAS 449

  Fly    64 SSTTSLSCDLHNVSLSNDGDSLKGSGTSGGNGG---------GGGG------GTSGGNATNAS-- 111
            ||.::|.|.|:           |..|.....|.         ..|.      ......||.|:  
Mouse   450 SSGSALECILY-----------KAEGAPPTQGSFAPLPCKPPAAGSCLLPRDSLPAAPATAAAPA 503

  Fly   112 ------------AGAGSGSVRDEL-----------------------------RRLCLVCGDVAS 135
                        .|..:..::|.|                             :::||:|||.||
Mouse   504 IYQPLGLNGLPQLGYQAAVLKDSLPQVYPPYLNYLRPDSEASQSPQYGFDSLPQKICLICGDEAS 568

  Fly   136 GFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEINKRRRKACQACRFQKCLLMGMLKEGVRLD 200
            |.||||.:|.:||.||||.::|...|.|...|:|.::|.|||.|.|||.:||...||        
Mouse   569 GCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRNDCIVDKIRRKNCPACRLRKCCQAGM-------- 625

  Fly   201 RVRGGRQKYRRNPVSNSYQTMQ-----LLYQS----NTTSLCDVKILEVLNSYEPDALSVQTPPP 256
             |.||| |:::   .|..:.|:     .|.||    |.:.....:|     ::.|:. .:|..||
Mouse   626 -VLGGR-KFKK---FNKVRVMRTLDGVALPQSVGLPNESQALGQRI-----TFSPNQ-EIQLVPP 679

  Fly   257 QVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNNNNNDP---NEILSVLSDIYDKELVSVIG 318
            .::..             :.:|..||       :..::|..|   :.:|:.|:.:.:::|:||:.
Mouse   680 LINLL-------------MSIEPDVV-------YAGHDNTKPDTSSSLLTSLNQLGERQLLSVVK 724

  Fly   319 WAKQIPGFIDLPLNDQMKLLQVSWAEILTLQLTFRSLP-FNGK-LCFATDVWMDEHLAKECGYTE 381
            |:|.:|||.:|.::||:.|:|.||..::...|.:||.. .:|: |.||.|:.::|...||   ..
Mouse   725 WSKSLPGFRNLHIDDQITLIQYSWMSLMVFGLGWRSYKHVSGQMLYFAPDLILNEQRMKE---LS 786

  Fly   382 FYYHCV---QIAQRMERISPRREEYYLLKALLLANCDIL--LDDQSSLRAFRDTILNSLNDVVYL 441
            ||..|:   ||.|...::....||:..:|.|||.|...|  |..||.....|.:.:..|...:.|
Mouse   787 FYSLCLTMWQIPQEFVKLQVTHEEFLCMKVLLLLNTIPLEGLRSQSQFEEMRSSYIRELIKAIGL 851

  Fly   442 LRHSSAVSHQQ--QLLLLLPSLRQADDILRRFW----------RGIA------RDEVIT--MKKL 486
            .:.....|.|:  ||..||.||.   |::::..          |.:|      ..|||.  :.|:
Mouse   852 RQKGVVPSSQRFYQLTKLLDSLH---DLVKQLHLYCLNTFIQSRTLAVEFPEMMSEVIAAQLPKI 913

  Fly   487 FLEMLEPL 494
            ...|::||
Mouse   914 LAGMVKPL 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 43/124 (35%)
NR_LBD 237..493 CDD:472173 74/285 (26%)
PgrNP_032855.2 Modulating, Pro-Rich 1..559 28/184 (15%)
Prog_receptor 1..557 CDD:460470 28/182 (15%)
AF3, mediates transcriptional activation (in isoform B). /evidence=ECO:0000250|UniProtKB:P06401 1..165
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
LXXL motif 1. /evidence=ECO:0000250|UniProtKB:P06401 56..60
LXXL motif 1. /evidence=ECO:0000250|UniProtKB:P06401 116..120
Mediates transcriptional transrepression (in isoform A). /evidence=ECO:0000250|UniProtKB:P06401 166..305
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..256
Nuclear localization signal. /evidence=ECO:0000255 184..188
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..364
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 391..447 9/55 (16%)
AF1, mediates transcriptional activation. /evidence=ECO:0000250|UniProtKB:P06401 453..539 13/96 (14%)
NR_DBD_GR_PR 556..633 CDD:143546 41/86 (48%)
AF2, mediates transcriptional activation. /evidence=ECO:0000250|UniProtKB:P06401 673..926 74/275 (27%)
NR_LBD_PR 679..926 CDD:132759 72/269 (27%)
Blue background indicates that the domain is not in the aligned region.

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