Protein Alignment ERR and nhr-142

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001263836.1
• Gene: nhr-142 / 185740
• WormBaseID: WBGene00018430
• Length: 441
• Species: Caenorhabditis elegans
• Alignment Length: 413
• Identity: 91/413 - (22%)
• Similarity: 173/413 - (41%)
• Gaps: 88/413 - (21%)

  Fly   127 CLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTC-PANNECEINKRRRKACQACRFQKCLLM 190
            |.||...|.|.|:||.||.||.|||:|::..:.:|:| .|:..|.|:|..|..|:.||::|||.:
 Worm    50 CRVCAHTAHGVHFGVLSCRACAAFFRRSVVMDKKYSCRKASQGCRIDKSERYLCRLCRYKKCLQL 114

  Fly   191 GMLKEGVRLDRVRGGRQKYRRNPVSNSYQTMQLLYQSNTTSLCDVKILEVLNSYEPDALS--VQT 253
            ||..:.|          ::.|:.:|::.:..    ||......||   :..:.:.|.:..  :..
 Worm   115 GMTADNV----------QWNRDMISSTDRKR----QSEEDDATDV---DAYSDWSPGSKKSCLDA 162

  Fly   254 PP--------PQVHTTSI-----TNDEASSSSGSI-KLESSVVTPNGTCIFQNNNNNDPNEILSV 304
            ||        .::|.|.:     .:|....|:.:: |::.::         :.:..|...:...:
 Worm   163 PPLYDLSRTLNKIHKTFMEFKIPVDDPVYQSTSTLGKMDWAL---------RRHRKNKKMQNFRI 218

  Fly   305 LSDIYDKELVSVIG--WAKQI------PGFIDLPLNDQMKLLQVSWA-----EILTLQL-TFRSL 355
            ::.|...:||.:.|  ..||.      ..|.:|.|.::..:.::.|.     |.||:.| .|...
 Worm   219 INTIRLDQLVDMWGMEMTKQAEFMMHSEEFRELSLEEKFSIFKLVWQVSQRFEKLTMSLEIFGKR 283

  Fly   356 PFNGKLCFAT--------DVWMDEHLAKECGYTE------FYYHCVQ----IAQRMERISPRREE 402
            ....|:...:        ||.:|  |:|...||.      |.:.|.|    :|:.:..:.|...|
 Worm   284 AIEEKILITSNSTAIRMEDVEID--LSKITDYTSLELRKMFQHVCSQMYEEVARPLMELDPSTIE 346

  Fly   403 Y-YLLKALL--LANCDILLDDQSSLRAFRDTILNSLNDVVYLLRHSSAVSHQQQLLLLLPSLRQA 464
            . |:|..::  :|...:..|...:...|...|.:.|:.  |.|:.....::..:|:.|:..:...
 Worm   347 ISYMLCQIIWHIAGKTLQGDILDAGEKFIGKIADDLHQ--YYLKEYKMSNYAGRLIKLMTVVNSL 409

  Fly   465 DDILRRFWRGIARDEVITMKKLF 487
            ..|      .:.|.:::.:.|:|
 Worm   410 QRI------HLDRLKIMELAKIF 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	34/90 (38%)
		NR_LBD	237..493	CDD:299703	53/302 (18%)
nhr-142	NP_001263836.1	ZnF_C4	50..119	CDD:197701	31/68 (46%)
		Hormone_recep	212..418	CDD:278530	42/215 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910