Protein Alignment ERR and nhr-178

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_503454.2
• Gene: nhr-178 / 184560
• WormBaseID: WBGene00017510
• Length: 421
• Species: Caenorhabditis elegans
• Alignment Length: 261
• Identity: 69/261 - (26%)
• Similarity: 109/261 - (41%)
• Gaps: 47/261 - (18%)

  Fly   107 ATNASAGAGSGSVRDELRRLCLVCGDVASGFHYGVASCEACKAFFKRTI--QGNIEYTCPAN-NE 168
            :|::.:...||:...|  ..|.||...|.|.|:||.||.||.|||:|||  ....:|.|... |:
 Worm     6 STSSPSSPNSGTNSSE--TTCKVCELSAHGVHFGVTSCRACAAFFRRTIVMSRTKKYRCRGGMNK 68

  Fly   169 CEINKRRRKACQACRFQKCLLMGMLKEGVRLDR-----------VRGGRQKYRRNPVSNSYQTMQ 222
            |.:|...|..|:.|||.||:.:||..|.|:.:|           .||...:....||.....|..
 Worm    69 CIVNTNDRYQCRLCRFNKCVTLGMTSENVQWNRDPFPEGRKKRDGRGSEDEVDLKPVKRPTFTSS 133

  Fly   223 LLYQSNT--TSLCDV-----KILEVLNSYEPDALSVQTPPPQVHTTSITNDEASSSSGSIKLESS 280
            :|..:.|  ..:.||     ||.::||.        :..|.......:.|.|        :||.|
 Worm   134 MLTPTITKPKRIVDVTLLAGKIQKILND--------KKIPEHPRLKKLNNLE--------RLELS 182

  Fly   281 VVTPNGTCIFQNNNNNDPNEILSV-LSDIY---DKELVSVIGWAKQIPGFIDLPLNDQMKLLQVS 341
            :.....    :...|.:..||..: :.:::   ::::|.|..|....|.|..|....:.::.:|.
 Worm   183 LREWRS----KQKINEEMEEISKLTIEEMFVFCEQQMVIVATWLAHCPYFQKLESTLKYQMFKVV 243

  Fly   342 W 342
            |
 Worm   244 W 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	40/109 (37%)
		NR_LBD	237..493	CDD:299703	20/110 (18%)
nhr-178	NP_503454.2	ZnF_C4	23..95	CDD:197701	32/71 (45%)
		Hormone_recep	193..397	CDD:278530	11/52 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910