Protein Alignment ERR and nhr-54

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_507179.3
• Gene: nhr-54 / 180106
• WormBaseID: WBGene00003644
• Length: 422
• Species: Caenorhabditis elegans
• Alignment Length: 345
• Identity: 75/345 - (21%)
• Similarity: 134/345 - (38%)
• Gaps: 65/345 - (18%)

  Fly   127 CLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCP-ANNECEINKRRRK--ACQACRFQKCL 188
            |.:|.....|.|:||.:|.||.|||:||:..|.:|.|. .:.:|:|.....|  .|:.|||:||:
 Worm    17 CAICYKAGHGQHFGVETCRACAAFFRRTVVLNRKYKCTRKSGKCKIGSDETKDVMCKFCRFKKCI 81

  Fly   189 LMGMLKEGVRLDRVRGGRQKYRRNPVSNSYQTMQLLYQSNTTSLCDVKILEVLNSYEPDA----- 248
            .:||..|.||.|:|..         ::....|.|.|.:...|||            :|:.
 Worm    82 DLGMTTENVRTDQVIN---------LNVEPSTSQSLVRLEMTSL------------QPETDDSNR 125

  Fly   249 LSVQTPPPQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNN---------------NNNDP 298
            :..|...|:....:|..|..:....|..:..:...|:...|.:.|               .:.:|
 Worm   126 VQYQIIHPRTRGPAILIDVNAIIKRSKTILETHFFPDDDVIVELNPLEKMTFCLRKLRSKQSWNP 190

  Fly   299 NEILSV----LSDIYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSWAEILTLQLTFRSLPFNG 359
            |....:    |.:.::.::.....|......|..||.::::.:.::.||....|:....:....|
 Worm   191 NFFTKINFLDLFEFWESQMEDTATWLMYSGEFRKLPNHEKIAIFKIVWAVWRRLERYTMTAQVFG 255

  Fly   360 KLCFATDVWMDEH--LAKECGYTEFYYHCVQIAQRMERISPRREEYYLLKALLLANCDILLDDQS 422
            :.|:...:.:..|  .|:...|...|.:...  |..|:|:.      |....::...||::....
 Worm   256 QKCYDEQILLHSHQDAARFTDYDVDYSYITD--QGFEKING------LFGGKMIQYFDIIVKPYL 312

  Fly   423 SLRAFRDTILNSLNDVVYLL 442
            .|. ..||      ::.|:|
 Worm   313 ELE-LSDT------EIAYIL 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	33/92 (36%)
		NR_LBD	237..493	CDD:299703	36/232 (16%)
nhr-54	NP_507179.3	ZnF_C4	16..88	CDD:197701	28/70 (40%)
		Hormone_recep	186..399	CDD:278530	27/155 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910