Protein Alignment ERR and nhr-50

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_507015.3
• Gene: nhr-50 / 180067
• WormBaseID: WBGene00003640
• Length: 359
• Species: Caenorhabditis elegans
• Alignment Length: 379
• Identity: 82/379 - (21%)
• Similarity: 140/379 - (36%)
• Gaps: 92/379 - (24%)

  Fly   127 CLVCG--DVASGFHYGVASCEACKAFFKRTIQG-NIEYTCPANNECEINKRRRKACQACRFQKCL 188
            |.|||  ||..  |:|..||.||.|||:|.... .:...|    .|.:..|....|:.||.:|||
 Worm     3 CQVCGCSDVEP--HFGALSCRACAAFFRRYFHSKKVVGQC----NCAVRFRNSHPCRECRIKKCL 61

  Fly   189 LMGMLKEGVRLDRVRGGRQKYRRNPVSNSYQTMQLLYQSNTTSLCDVKIL-EVLNSYEPDALSVQ 252
            .:||..|.|:..|.|...:|.:...:|.:..:......|...|....:|: ...:|....|.:.|
 Worm    62 SIGMNPEKVQEKRERHPPKKNKPPSISEALTSSSSTPPSLPISQLPSRIIPRDCSSITLTAFNWQ 126

  Fly   253 TPPPQVHTTSITNDEASSSSGS-IKLESSVVT--------PNGTCIFQNNNNNDPNEIL------ 302
            ...|:.:..:.|.||.:....| .|:|..::.        |:.|   .|....|...:|
 Worm   127 KCQPKRNYMTRTLDETNYYQLSCFKIEDCMMIWRIVEDLFPSLT---WNLRKLDKEALLRNFLPK 188

  Fly   303 -SVLSDIYDKELVSVIGWAK-----------------QIPGFIDLPLNDQMKLLQVSWAEILTLQ 349
             |||:...|.| |.|..::|                 .:|....:|..|.:|:    :..::...
 Worm   189 WSVLTAAIDME-VKVQRYSKVNNTEEFKRMIVDFFTYSMPEKFKMPPEDILKV----FGPMIVYY 248

  Fly   350 LTFRSLPFNGK-------LCFATDVWMD---EHLAKECG-----------------YTEFYYHCV 387
            :|...||.:.|       :..|..:..|   .:::.||.                 .|:..:..:
 Worm   249 VTKIILPIHEKGLDQPEFMALALIILFDGAYSNISVECSEMCRTIRNLIFRELKNYQTDKNFDEI 313

  Fly   388 QIAQRMER---ISPRREEYYLLKALLLANCDILLDDQSSLRAFRD--TILNSLN 436
            |.|..::.   :....:::|.         ::|:.|..::....|  .:||.||
 Worm   314 QFADTVDTLNIVEKGEKKFYE---------ELLICDMHNVHLHEDYRLLLNELN 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	33/92 (36%)
		NR_LBD	237..493	CDD:299703	47/266 (18%)
nhr-50	NP_507015.3	ZnF_C4	3..68	CDD:197701	27/70 (39%)
		HOLI	156..327	CDD:214658	28/178 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910