Protein Alignment ERR and nhr-108

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_506987.1
• Gene: nhr-108 / 180065
• WormBaseID: WBGene00003698
• Length: 338
• Species: Caenorhabditis elegans
• Alignment Length: 380
• Identity: 87/380 - (22%)
• Similarity: 139/380 - (36%)
• Gaps: 116/380 - (30%)

  Fly   127 CLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEINKRRRKACQACRFQKCLLMG 191
            |:|||:::....:|..||.||..||:|.|..........|..|::.|..||.||:|||||||.:|
 Worm    10 CMVCGEISYSIRFGAVSCRACAEFFRRKIVSKARIPKRCNGACDLGKYHRKTCQSCRFQKCLKIG 74

  Fly   192 MLKEGVRLDRVRGGRQKYRRNPV---SNSYQT----MQLLYQSNTTSLCDV-----KILEVLNSY 244
            ||::.|.           .|.||   |.:.||    ::..|.....|..:|     ||.:..|..
 Worm    75 MLEKVVA-----------SRTPVNRRSENNQTILSGLEKAYDKLENSRDNVFDRKNKIPKYCNHQ 128

  Fly   245 EPDALSVQTPPPQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNNNN--NDPNEILSVLSD 307
            |.|.:                         .:::..:::.:....|::.::  |:.|::||. ..
 Worm   129 ELDDM-------------------------FEIDIKLISTHFIQFFESKSSLENNQNKVLST-HF 167

  Fly   308 IYDKELVSVIGWAKQIPGFIDLPLND------------------------QMKLLQVSW------ 342
            |....|:.|...|...|.:| ||.||                        ...:||..|
 Worm   168 IIRFSLLEVAFRAFGKPTYI-LPNNDIIDVSKLDKVYQHLETGEDERGKNSQVILQRFWQMNEKT 231

  Fly   343 --AEILTLQLTFRSLPFNGKLCFATDVWMDEHLAKECGYTEFYYHCVQIAQRME-RISPRREEY- 403
              .|:..:.|......|   || |...|       :.|.......|::..|||. ::.....||
 Worm   232 MKTEVFPVNLDQSEFLF---LC-ALIYW-------DFGIENQSEKCLEECQRMRTQVLKELTEYE 285

  Fly   404 ---YLLKALLLANCDILLDDQSSLRAFRDT-ILNSLNDVVYLLRHSSAVSHQQQL 454
               |               .::.||..:.. ||.:|...:.:::||..:|:...|
 Worm   286 KSNY---------------PENELRVAQVIGILQALQKTLDVIQHSGYISNVYNL 325

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	35/92 (38%)
		NR_LBD	237..493	CDD:299703	46/258 (18%)
nhr-108	NP_506987.1	ZnF_C4	9..75	CDD:197701	27/64 (42%)
		HOLI	134..309	CDD:214658	38/202 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910