Protein Alignment ERR and nhr-53

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_741644.1
• Gene: nhr-53 / 180053
• WormBaseID: WBGene00003643
• Length: 364
• Species: Caenorhabditis elegans
• Alignment Length: 369
• Identity: 90/369 - (24%)
• Similarity: 141/369 - (38%)
• Gaps: 129/369 - (34%)

  Fly   127 CLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEINKRRRKACQACRFQKCLLMG 191
            ||:|.:||.|.|:|.|:|.||.|||:||:|.|..:.||.|.:|.|....|..|:|||::|||.:|
 Worm    23 CLICCEVADGHHFGAAACRACAAFFRRTVQLNKVHDCPKNGQCFILSNVRNMCRACRYEKCLEVG 87

  Fly   192 MLKEGVRLDRVRGGRQ----KYRRNPVSN----------------------------SYQTMQLL 224
            |.:..|:..|.:.||:    ..|..||.:                            |:..:|::
 Worm    88 MQRSSVQQKRDQLGRRDGLPTNREEPVLDTMRRAYEKLLVVRKKVHNRQENQLPRAISFNELQVV 152

  Fly   225 YQSNTT----SLCDV--KILEVL---------NSYEPDALSVQTPPPQVHTTSITNDEASSSSGS 274
            ||:..|    .||:.  :..|:|         |.:.|..|.                |:|.....
 Worm   153 YQNEMTVIYQFLCEAFPEYSELLPDTKRSLFKNFFLPFTLL----------------ESSYYGYL 201

  Fly   275 IKLESSVVTPNGTCI--------FQNNN------------------------------NNDPNEI 301
            .|.|:.::.|:|..:        |.||:                              |.|.||.
 Worm   202 TKQENVMLIPSGDYVDLAHLESYFNNNHHTFSQKDTISMFAQQFRMLHTSITVPLSAENVDVNEF 266

  Fly   302 LSVLSDIYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSWAEILTLQLTFRSLPFNGKLCFATD 366
            |:         |.::|.|...:....|.. |.|.:.:::..|.|..|...::|:          :
 Worm   267 LA---------LAAIILWESDLEVEADRK-NVQEEAVKIKSAIIKDLLFHYQSI----------N 311

  Fly   367 VWMDEHLAKECGYTEFYYHCVQIAQRMERISPRREEYYLLKALL 410
            |:.|  :|...|..      :.|...::|.|.|..||..:|.||
 Worm   312 VYAD--VAMRLGAV------LSILPSIQRASHRFHEYMEIKNLL 347

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	41/121 (34%)
		NR_LBD	237..493	CDD:299703	42/221 (19%)
nhr-53	NP_741644.1	NR_DBD_like	23..98	CDD:295381	35/74 (47%)
		Hormone_recep	134..340	CDD:278530	44/249 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910