Protein Alignment ERR and nhr-42

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_504771.1
• Gene: nhr-42 / 179084
• WormBaseID: WBGene00003632
• Length: 356
• Species: Caenorhabditis elegans
• Alignment Length: 340
• Identity: 84/340 - (24%)
• Similarity: 132/340 - (38%)
• Gaps: 108/340 - (31%)

  Fly   120 RDELRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQG--NIEYTCPANNECEINKRRRKACQAC 182
            |....:.||:|||.|...|:|..||.||.|||:|.:.|  ||...|  :.:|:::...||.|.:|
 Worm     3 RQTTSQTCLICGDSADSLHFGALSCRACAAFFRRKVAGRRNIFRRC--DRQCKVDTGMRKLCASC 65

  Fly   183 RFQKCLLMGMLKEGVRLDRVRGGRQKYRRNPVS--NSYQTMQLLYQSNTTSLCDVKILEVLNSYE 245
            |:.|||.:|| :|...|.|:....|.|:::.|.  ::|:.        :||..| .:||.|.|
 Worm    66 RYDKCLKVGM-RESAVLSRLAKKNQNYKKSIVGSPDAYEP--------STSTSD-SVLENLQS-- 118

  Fly   246 PDALSVQTPPPQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNNNN---NDPNEILSVLSD 307
                       ..|....|.....:.|     |:.|   :..|.::..|:   .|...::..|.:
 Worm   119 -----------AYHKLEETRKRVFNIS-----ETHV---SQCCNYKRMNDVFFEDIKLVMEHLLE 164

  Fly   308 IYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSWAEILTLQLTFRSLPFNGKLCFATDVWMDEH 372
            .:.|..:|                .:|.|||.|.:           .:||
 Worm   165 TFKKSDIS----------------QEQEKLLCVHF-----------MVPF--------------- 187

  Fly   373 LAKECGY----TEFYYHCVQIAQRMERISPRR-EEYYLLKALLLANCDILLDD--QSSLRAFR-- 428
            :..|.||    ::.:|     ....:.|...| ||||       :|.|...|:  :|:...||
 Worm   188 ILFEGGYKSTNSDLFY-----LPSGDFIDENRIEEYY-------SNPDDQNDNSAKSAAEVFRPY 240

  Fly   429 -----DTILNSLNDV 438
                 .|:...|:||
 Worm   241 WKLNKQTLKTHLDDV 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	37/99 (37%)
		NR_LBD	237..493	CDD:299703	42/219 (19%)
nhr-42	NP_504771.1	ZnF_C4	9..78	CDD:197701	31/71 (44%)
		HOLI	151..327	CDD:214658	31/159 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910