Protein Alignment ERR and nhr-59

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_503624.2
• Gene: nhr-59 / 178707
• WormBaseID: WBGene00003649
• Length: 416
• Species: Caenorhabditis elegans
• Alignment Length: 446
• Identity: 94/446 - (21%)
• Similarity: 159/446 - (35%)
• Gaps: 129/446 - (28%)

  Fly   121 DELRRL----------CLVCGDVASGFHYGVASCEACKAFFKRTIQG-NIEYTC-PANNECEINK 173
            |..|:|          |.|||..:.|.|:|..:|.||.|||:|...| |.|..| .....|:|..
 Worm     4 DSSRKLALKAVVNQTFCQVCGQESHGAHFGAITCRACAAFFRRVAAGANFEVKCKDGRGRCKILT 68

  Fly   174 RRRKACQACRFQKCLLMGMLKEGVRLDRVRGGRQKYRRNPVSNSYQTMQLLYQSNTTSLCDVKIL 238
            ..|..|:.||.:||..:||                        ..|..|....|..||   .|:.
 Worm    69 NGRSCCKKCRLKKCKDIGM------------------------DIQNFQFNRDSFATS---TKVA 106

  Fly   239 EVLNSY--EPDALSVQTPPPQVHTTS----------------ITNDE----ASSSSGSIKLESSV 281
            ..|:::  .|:.|...:|.....|:.                :.:|.    |...:...||.||:
 Worm   107 PSLSTFLGRPEFLLSCSPGTSASTSQNKFIDLSPFIKNCKQVLMDDRKIPLAPGKTRLQKLSSSL 171

  Fly   282 VTPNGTCIFQNNNNNDPNEI----LSVLS-----DIYDKELVSVIGWAKQIPGFIDLPLNDQMKL 337
                   .|:.:.||...:.    :|.|.     .|::.||:....|......|.||..:.:.|.
 Worm   172 -------DFEISANNKKKKTDLRKVSTLGFSEAIQIFENELLMTSKWLAHFEEFHDLGNDFKFKF 229

  Fly   338 LQVSWAEILTLQLTFRSLPF-------NGK---LCFATDVWMDEHLAKECGYTEFY--YHCVQIA 390
            |:.:|.....|:...|:...       |||   :..|.:..:|....|  ...|::  |...:|:
 Worm   230 LECTWNIWNRLERVARTAALLRDQKISNGKGNEIILARNCVIDLRTVK--FEVEWFTNYSLSEIS 292

  Fly   391 QRMERI---------------SPRREEY-YLLKALLLANCDILLDDQSSLRAFRDTILNSLNDVV 439
            ..:|.:               :|...|. ::|..:.|......:|.|     :::|| ::|..::
 Worm   293 YFIEGVGDWSMNKPLQAIIDFNPTEIELNFMLAQISLTCASKQMDSQ-----YQETI-DNLQKLI 351

  Fly   440 YLLRHSSAVSHQQQLLLLLP--------SLRQADDILRRFWRGIARDEVITMKKLF 487
            ....||..:...:     ||        .::..:.:||..|.   |.|.:::.::|
 Worm   352 ADDLHSYYIKEMR-----LPVYSSRIQKMMKVNNMVLRVMWE---RKEKLSIARMF 399

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	31/107 (29%)
		NR_LBD	237..493	CDD:299703	57/318 (18%)
nhr-59	NP_503624.2	ZnF_C4	20..>71	CDD:197701	20/50 (40%)
		Hormone_recep	182..392	CDD:278530	41/225 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910