Protein Alignment ERR and nhr-56

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_001033487.1
• Gene: nhr-56 / 178699
• WormBaseID: WBGene00003646
• Length: 408
• Species: Caenorhabditis elegans
• Alignment Length: 422
• Identity: 93/422 - (22%)
• Similarity: 166/422 - (39%)
• Gaps: 128/422 - (30%)

  Fly   124 RRLCLVCGDVASGFHYGVASCEACKAFFKRT-IQGNIEYTCPANNECEINKRRRKACQACRFQKC 187
            :.||.:||:.|.|.|:||.||.||.|||:|| :.|  |..||..| |:|:|..:..|:.||.:.|
 Worm     7 KSLCKICGNPAFGNHFGVLSCRACAAFFRRTNVDG--ETFCPIGN-CKIDKHGKFYCKKCRLRIC 68

  Fly   188 LLMGMLKEGVRLDRVRGGRQKYRRNPVSNSYQTMQLLYQSNTTSLCD----------VKILEVLN 242
            |..||                     .:|.:|..:.|..::|:...|          .|:.:.:.
 Worm    69 LEAGM---------------------DANKFQHDRDLISTSTSESSDSSGSFSFSQRSKVPKSMA 112

  Fly   243 SY----------EPD-ALSVQTPPPQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNNNN- 295
            ::          ||| |..|:|   .|..|.:.| :|....|::..:.          |.:|:|
 Worm   113 NFLGRPAFILSCEPDKASKVKT---IVDVTFLIN-QAFDIFGNVDRKR----------FSSNSNL 163

  Fly   296 -----------NDPNEILSVLSDI--------YDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVS 341
                       |:.:..||.:..:        ::::.:....|......|.:|||:.:|::|:|:
 Worm   164 GRMTKKFEDLQNEKSSNLSTIKVLGLKESMIFWEQDFLRTARWLSHFDEFQELPLSIRMQILKVA 228

  Fly   342 WA-------------EILTLQLTFRSLPFNGKLC------FATDV-WMDEHLAKECGYTEFYYHC 386
            |.             |....||. ::....||..      |..|| |...:..::..|   |..|
 Worm   229 WILWGRLDKLVKTANERKNQQLN-QNFYMIGKDVGIDIGNFEVDVSWCTNYSKEQLAY---YLDC 289

  Fly   387 VQ------IAQRMERISPRREEY-YLLKALLLANC------DILLDDQSSLRAFRDTILNSLNDV 438
            ..      |...:..:.|...|. ::|..|.||:.      |:|:        |.|.:|..:::.
 Worm   290 HHDEPFNIIVDAISDLKPSDMELNFMLLELCLAHAGKQHQGDVLM--------FTDRLLEVVSNE 346

  Fly   439 VYLLRHSSAVSHQQQLLLLLPSLRQADDILRR 470
            ::....|..:|:...   .:..:.:.::::||
 Worm   347 LHDYYQSEQISNYSS---RITKMMKINNLIRR 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	33/93 (35%)
		NR_LBD	237..493	CDD:299703	54/298 (18%)
nhr-56	NP_001033487.1	ZnF_C4	9..76	CDD:197701	33/90 (37%)
		Hormone_recep	177..390	CDD:365875	39/214 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910