Protein Alignment ERR and nhr-106

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_503219.1
• Gene: nhr-106 / 178571
• WormBaseID: WBGene00003696
• Length: 382
• Species: Caenorhabditis elegans
• Alignment Length: 238
• Identity: 57/238 - (23%)
• Similarity: 95/238 - (39%)
• Gaps: 57/238 - (23%)

  Fly   123 LRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNI-EYTCPANNECEINKRRRKACQACRFQK 186
            ::..|.:|...|.|.|:|..:|..|.|||:|.:.... ..:|..::.|.....:...|::||.:|
 Worm     1 MQTTCEICEVPAHGIHFGAITCRGCAAFFRRAVNTKTNRKSCKYSSNCTNFTGKFPQCKSCRMRK 65

  Fly   187 CLLMGMLKEGVRLDRVRGGRQKYRRNPVSNSYQTM-----QLLYQSN---TTSLCDV-----KIL 238
            |:.|||:.|.|::           ..|:|.|.:..     .:|:.:|   |.:..||     :.|
 Worm    66 CIKMGMMPEKVKV-----------MQPISQSLEIFVSRPNLILFTNNYDKTRNYIDVSNLITRGL 119

  Fly   239 EVLNSYEPDALSVQTPPPQVHTTSITNDEASSSSGSIKLESS----VVTPNGTCIFQNNNNNDPN 299
            |:|....|..|.:          ..||.|..:|........|    |||...
 Worm   120 EILKQGFPTPLGI----------GKTNLERMASGVEFSTAESKIVDVVTGKS------------- 161

  Fly   300 EILSVLSDIYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSW 342
                 :|.:::.:.:|...|..::..|..||:..||:|||..|
 Worm   162 -----VSMVWEFDFISTAKWLTRLQDFCTLPMRIQMQLLQTIW 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	26/94 (28%)
		NR_LBD	237..493	CDD:299703	25/110 (23%)
nhr-106	NP_503219.1	ZnF_C4	4..74	CDD:197701	22/69 (32%)
		Hormone_recep	150..357	CDD:278530	16/68 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910