Protein Alignment ERR and nhr-55

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_503215.2
• Gene: nhr-55 / 178570
• WormBaseID: WBGene00003645
• Length: 424
• Species: Caenorhabditis elegans
• Alignment Length: 428
• Identity: 96/428 - (22%)
• Similarity: 152/428 - (35%)
• Gaps: 98/428 - (22%)

  Fly   127 CLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEINKRRRKACQACRFQKCLLMG 191
            |.|||..:.|.|:|..:|.||.|||:|....|....|..|..||..|.....|:.||.:||..:|
 Worm    28 CQVCGQKSHGKHFGAVTCRACAAFFRRCGSANNFKPCRRNMNCEFLKNGWFNCKPCRLKKCQDVG 92

  Fly   192 MLKEGVRLDRVRGGRQKYR------RNPVSNSYQTMQ-----LLYQSNTTSLC------DVKILE 239
            |..|..:.||.....:|.:      .|.|..|..|..     ::..:.|...|      ||:.|
 Worm    93 MTIENFQFDRDSFSPKKAKIALENFHNQVPFSIATFTGRSNLIVISAPTEEECIPKCYIDVQFL- 156

  Fly   240 VLNSYEPDALS---VQTPPPQVHTTSITNDEASSSS--GSIKLESSVVTPNGTCIFQNNNNNDPN 299
                  .|.||   .:.|...:||.:.....|....  ...|.|..::|..|           ..
 Worm   157 ------IDKLSNVLKEGPEVPLHTPNALEKLALGLQIIRGRKRELKLITKLG-----------KE 204

  Fly   300 EILSVLSDIYDKELVSVIGWAKQIPGFIDLP---LNDQMKLLQVSWAEILTLQLTFRSLPFNGKL 361
            |.|.:..|    :::.|..|......|..|.   .::.:|.:...|:.:.||.||    ....:|
 Worm   205 ETLGLWQD----DMMKVAKWLTYFDDFQQLSHRMRSEMLKGMWKVWSRLETLALT----AMGRRL 261

  Fly   362 CFATDVWMDEHLAKE---------------CG-YT----EFYYHC------VQIAQRMERISPRR 400
            .......:..|..||               |. ||    .|:...      .|:.|.|..:.|..
 Worm   262 MICQKDMIMTHTEKEQVMAHPKQIEVDISWCSRYTLEQLRFFADSDLDDRNEQVIQAMMELQPTD 326

  Fly   401 EE--YYLLKALL-----LANCDILLDDQSSLRAFRDTILNSLNDVVYLLRHSSAVSHQQQL--LL 456
            .|  |.:.:|.|     ....::|    .....|::|:.|.|:|  |.:...:...:..::  |:
 Worm   327 VELSYMMCQACLHYAGKRYQGEVL----EIAERFQETLSNHLHD--YYVNRMNMPQYSMRVANLM 385

  Fly   457 LLPSLRQADDILRRFWRGIARDEVITMKKLF-LEMLEP 493
            .:.:..|.|     .:||..:.::..:..:| ||...|
 Worm   386 KINNHIQLD-----IYRGRVKYDLARVFDVFYLEFSHP 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	33/95 (35%)
		NR_LBD	237..493	CDD:299703	56/299 (19%)
nhr-55	NP_503215.2	ZnF_C4	27..96	CDD:197701	27/67 (40%)
		Hormone_recep	194..401	CDD:278530	44/236 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910