Protein Alignment ERR and nhr-99

DIOPT Version :9

• Sequence 1: NP_648183.3
• Gene: ERR / 38912
• FlyBaseID: FBgn0035849
• Length: 496
• Species: Drosophila melanogaster
• Sequence 2: NP_503214.1
• Gene: nhr-99 / 178569
• WormBaseID: WBGene00003689
• Length: 418
• Species: Caenorhabditis elegans
• Alignment Length: 374
• Identity: 73/374 - (19%)
• Similarity: 123/374 - (32%)
• Gaps: 98/374 - (26%)

  Fly   125 RLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEINKRRRKACQACRFQKCLL 189
            |.|.:|...:.|.|:|..:|.||..||:|..:......|..||.|:..|.....|:.||.|||..
 Worm    24 RTCEICDKPSHGKHFGAVTCRACAMFFRRFGRCKNMKPCEMNNNCQFPKNGYFNCKKCRLQKCWD 88

  Fly   190 MGMLKEGVRLDRVRGGRQKYRRNPVSNSYQ---------TMQLLYQSNTTSLCDVKILEVLNSYE 245
            :||                     .::::|         |:|:.......:|..:..|.:.|:.|
 Worm    89 VGM---------------------TTDTFQSVISKLAKPTLQVKIPETIGTLIGLPNLIIFNAPE 132

  Fly   246 PDALSVQTPPPQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNN--------------NNN 296
            .:|       |.....:..:.....|.|...|.:.:.||   .|.||:              .|.
 Worm   133 FEA-------PSSICKNFIDVRYLVSQGEQILRTGLETP---IIAQNSLEKMALGLEYIRKMRNP 187

  Fly   297 DPNEILSV----LSDIYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSW--------------- 342
            ..|.|..:    :..::..:.:....|......|..||...|||.|:..|
 Worm   188 KINNIRRIGQKEVFTLWQDDFLKTAKWLTYFSEFQQLPDGLQMKFLKSIWKLWSRFERLVTTMIG 252

  Fly   343 -------AEILTLQLTFRSLPFNGKLCFATDVWMDEHLAKEC---GYTEFYYHCVQIAQRMERIS 397
                   :.::.::|....:.|:.|.......|...:..::.   ||:.......:|.|.|..:.
 Worm   253 RRNSACSSNMVLIKLDDTQVVFDIKKIDVDVSWQSRYNVEQLKLFGYSYLDEKYDEIIQEMIDLD 317

  Fly   398 PRREEYYLLKALLLANCDILL---------DDQSSLRAFRDTILNSLND 437
            |...|      |....|.:.|         |........:.:|.|:|:|
 Worm   318 PTNVE------LSFMVCQLCLHHIGKKFQGDILKVAERLQSSIANNLHD 360

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ERR	NP_648183.3	NR_DBD_ERR	121..217	CDD:143544	25/91 (27%)
		NR_LBD	237..493	CDD:299703	44/253 (17%)
nhr-99	NP_503214.1	ZnF_C4	25..94	CDD:197701	24/89 (27%)
		Hormone_recep	185..395	CDD:278530	31/182 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910