DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ERR and esrrg

DIOPT Version :9

Sequence 1:NP_648183.3 Gene:ERR / 38912 FlyBaseID:FBgn0035849 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_012818028.1 Gene:esrrg / 100101684 XenbaseID:XB-GENE-486172 Length:484 Species:Xenopus tropicalis


Alignment Length:520 Identity:195/520 - (37%)
Similarity:257/520 - (49%) Gaps:99/520 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LHIKQE-----------VDTPSAS----------CFSPSSKSTATQSGTNGLKSSPSVSPERQLC 63
            ||.::|           |.|.|.|          |...|.......|.::.:|:.|         
 Frog    14 LHYEEEEMVYIHRHGVNVRTSSFSENKTLPSWLLCRMSSKDRHIDSSCSSYIKTEP--------- 69

  Fly    64 SSTTSLSCDLHNVSLSNDGDSLKGSGTSGGNGGGGG----------GGTSGGNATNASAGAGSGS 118
            ||..||:..:::.|.....|: .||.:|..||...|          .|..|...........|.:
 Frog    70 SSPASLTDSINHHSPGGSSDA-SGSYSSTMNGHQNGLDSPPLYPSATGLGGNGPVRKRYDDCSST 133

  Fly   119 VRDEL------------RRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNECEI 171
            :.:|.            :||||||||:|||:||||||||||||||||||||||||:|||.|||||
 Frog   134 IAEESQTKCEYMLNAMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEI 198

  Fly   172 NKRRRKACQACRFQKCLLMGMLKEGVRLDRVRGGRQKY-RRNPVSNS-YQTMQLLYQSNTTSLCD 234
            .|||||:||||||.|||.:||||||||||||||||||| ||....|| |...||:..:....   
 Frog   199 TKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPY--- 260

  Fly   235 VKILEVLNSYEPDALSVQTPPPQVHTTSITNDEASSSSGSIKLESSVVTPNGTCIFQNNNNNDPN 299
            .||:..|...||:.:... |.|.|..:.|                                    
 Frog   261 NKIVSHLLVAEPEKIYAM-PDPTVPDSDI------------------------------------ 288

  Fly   300 EILSVLSDIYDKELVSVIGWAKQIPGFIDLPLNDQMKLLQVSWAEILTLQLTFRSLPFNGKLCFA 364
            :.|:.|.|:.|:|||.:|||||.||||..|.|.|||.|||.:|.|||.|.:..|||.|..:|.:|
 Frog   289 KALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGIVNRSLSFEDELVYA 353

  Fly   365 TDVWMDEHLAKECGYTEFYYHCVQIAQRMERISPRREEYYLLKALLLANCDIL-LDDQSSLRAFR 428
            .|..|||..:|..|..|.....:|:.::.:.:...:||:..|||:.|||.|.: ::|..:::..:
 Frog   354 EDYIMDEDQSKLAGLLELNNAILQLVKKYKTMKLEKEEFVTLKAIALANSDSMHIEDIEAVQKLQ 418

  Fly   429 DTILNSLNDVVYLL-RHSSAVSHQQQLLLLLPSLRQADDILRRFWRGIARDEVITMKKLFLEMLE 492
            |.:..:|.|  |.. :|........:||:.||.|||......:.:..|..:..:.|.||||||||
 Frog   419 DVLHEALQD--YEAGQHIEDPRRAGKLLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEMLE 481

  Fly   493  492
             Frog   482  481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ERRNP_648183.3 NR_DBD_ERR 121..217 CDD:143544 79/108 (73%)
NR_LBD 237..493 CDD:299703 83/258 (32%)
esrrgXP_012818028.1 NR_DBD_ERR 150..244 CDD:143544 78/93 (84%)
NR_LBD_ERR 263..482 CDD:132744 83/258 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 139 1.000 Domainoid score I4746
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H55581
Inparanoid 1 1.050 283 1.000 Inparanoid score I2805
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D297679at33208
OrthoFinder 1 1.000 - - FOG0001624
OrthoInspector 1 1.000 - - otm48489
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5621
SonicParanoid 1 1.000 - - X1027
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.090

Return to query results.
Submit another query.