DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uxs and RHM1

DIOPT Version :9

Sequence 1:NP_648182.1 Gene:Uxs / 38911 FlyBaseID:FBgn0035848 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_177978.1 Gene:RHM1 / 844193 AraportID:AT1G78570 Length:669 Species:Arabidopsis thaliana


Alignment Length:325 Identity:90/325 - (27%)
Similarity:146/325 - (44%) Gaps:34/325 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 KRILITGGAGFVGSHLVDDLM--VQGHEVIVVDNF-FTGRKRNVEHWLGHENFELIHHDI----- 172
            |.|||||.|||:.||:.:.|:  ...::::|:|.. :....:|:.......||:.:..||     
plant     7 KNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIASADL 71

  Fly   173 VNPLFIE--IDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKV---LIASTSEV 232
            ||.|.|.  ||.|.|.|:.....:...|..:..|.|..|| :||..|.:|..::   :..||.||
plant    72 VNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGT-HVLLEACKVTGQIRRFIHVSTDEV 135

  Fly   233 YG----DPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRM 293
            ||    |..|.....:.....||      |...|..:|.|..||.:...:.|...|..|.|||..
plant   136 YGETDEDALVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194

  Fly   294 HMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGM-IALMASNYTQPVNLGNPVEQT 357
            ...  :::..|||.|:|.:.:.::|:|...||:.|..|:.:.. :.|.........|:|...|:.
plant   195 FPE--KLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERR 257

  Fly   358 IGEFAEIIKKLVG-GPSVIKQSKAMEDDP---QRRKPDITRARQLLHWEPKVPLETGLQRTISYF 418
            :.:.|:.|.||.. .|..  ..|.:::.|   ||...|..:.:: |.|..:...|.||::|:.::
plant   258 VNDVAKDICKLFNMDPEA--NIKFVDNRPFNDQRYFLDDQKLKK-LGWSERTTWEEGLKKTMDWY 319

  Fly   419  418
            plant   320  319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UxsNP_648182.1 WcaG 116..424 CDD:223528 90/325 (28%)
UGD_SDR_e 116..419 CDD:187541 90/325 (28%)
RHM1NP_177978.1 PLN02260 1..669 CDD:215146 90/325 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D848823at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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