DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uxs and UXS6

DIOPT Version :9

Sequence 1:NP_648182.1 Gene:Uxs / 38911 FlyBaseID:FBgn0035848 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001325413.1 Gene:UXS6 / 817426 AraportID:AT2G28760 Length:374 Species:Arabidopsis thaliana


Alignment Length:330 Identity:192/330 - (58%)
Similarity:248/330 - (75%) Gaps:5/330 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 TSTPRKYPKVKYLN----YKNRKRILITGGAGFVGSHLVDDLMV-QGHEVIVVDNFFTGRKRNVE 157
            |:|.:..|....|.    :::..|||:||||||:||||||.||. :.:||||.||:|||.|.|::
plant    40 TTTTKPPPMPSPLRNSKFFQSNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLK 104

  Fly   158 HWLGHENFELIHHDIVNPLFIEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMA 222
            .|:||..||||.||:..|||:|:|:|||||.||||..|.||||||||||.:||:|:|||||||.|
plant   105 KWIGHPRFELIRHDVTEPLFVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 169

  Fly   223 KVLIASTSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFN 287
            ::|:.|||||||||.||||.|:|||:|||||.|:||||||||:|||.:.|.:|..:::|:|||||
plant   170 RILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 234

  Fly   288 TYGPRMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQPVNLGN 352
            ||||||:::|||||||||.||||.|.:||...|.|||||.||||:|:|::.||..:.|.|:|:||
plant   235 TYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGDQTGPINIGN 299

  Fly   353 PVEQTIGEFAEIIKKLVGGPSVIKQSKAMEDDPQRRKPDITRARQLLHWEPKVPLETGLQRTISY 417
            |.|.|:.|.||.:|:|:.....||..:...|||::|||||::|:::|.|||||.|..||......
plant   300 PGEFTMVELAETVKELIKPDVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGLPLMEED 364

  Fly   418 FRNEL 422
            ||..|
plant   365 FRLRL 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UxsNP_648182.1 WcaG 116..424 CDD:223528 188/308 (61%)
UGD_SDR_e 116..419 CDD:187541 185/303 (61%)
UXS6NP_001325413.1 UGD_SDR_e 62..366 CDD:187541 185/303 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 394 1.000 Domainoid score I142
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41609
Inparanoid 1 1.050 411 1.000 Inparanoid score I452
OMA 1 1.010 - - QHG61048
OrthoDB 1 1.010 - - D848823at2759
OrthoFinder 1 1.000 - - FOG0002011
OrthoInspector 1 1.000 - - otm3268
orthoMCL 1 0.900 - - OOG6_100713
Panther 1 1.100 - - O PTHR43078
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1322
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.